Information on SUBCLASS 4.24.1 |
Subclass Accession number: 6311
Subclass: 4.24.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 7.1 +/- 10.1 Average RMSD (Å) : 0.733 +/- 0.252 Consensus geometry
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Consensus Sequence: | hXhcpXpX |
(φψ)-conformation: | bbplalbb |
Pattern: | x | x | [HVY] | [ALV] | x | [MPW] | [GN] | [HST] | [GS] | [HRT] | x | x | [TV] | x |
Conservation: | -1.190 | -1.190 | 0.322 | -0.027 | -0.492 | -0.376 | 2.019 | 0.089 | 1.819 | -0.027 | -0.725 | -0.725 | 0.996 | -0.492 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e1a_A_239 | 1e1a | A | 239 | 252 | LLVANWGSSHIEVF | EEEEEETTTEEEEE | bxbxxpvavbbxbb |
1gl4_A_421 | 1gl4 | A | 429 | 442 | HSYVVMNHGRSYTA | EEEEETTT-EEEEE | bbbbbpvavbbbbb |
1q40_A_81 | 1q40 | A | 89 | 102 | DGHLIPGTGTFVVH | EEEEETTTTEEEEE | bbbxxxvavbxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1q40_A_81 | 1q40 | A | GOLGLYCEROL | T - 86 |
1q40_A_81 | 1q40 | A | GOLGLYCEROL | S - 87 |
1q40_A_81 | 1q40 | A | MSESELENOMETHIONINE | D - 89 |
1q40_A_81 | 1q40 | A | MSESELENOMETHIONINE | V - 100 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e1a_A_239 | 1e1a | A | DFPDFP BINDING SITE | W - 244 |
Clusters included in this Subclass |
CLUSTER: HA.3.281 |