Logo
Information on SUBCLASS 4.25.1
Subclass Accession number: 6312
Subclass: 4.25.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 13.0 +/- 12.4
Average RMSD (Å) : 0.900 +/- 0.173

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXXXDpXX
(φψ)-conformation: bpaeaabb
Pattern: xx[LY][ATV]x[KPR]x[GS][D][DET][FKT]x[AFV][FR]x[HTY]x[NTV]
Conservation:-0.845-1.0020.407-0.058-0.4510.099-1.3171.0683.1660.178-0.766-0.294-0.4510.222-0.5300.1780.768-0.373
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fep_A_1721fep   A177194FSLTGPLGDEFSFRLYGNEEEEEE-SSSEEEEEEEEbbbbexaeaabbbbbbbb
1k32_A_3641k32   A364381IRYVRRGGDTKVAFIHGTEEEEEE-SSSEEEEEEEExabbbpaeaabbbbbbbb
1pn2_A_2391pn2   A241258RVLAWKESDDTIVFQTHVEEEEEE-SSSEEEEEEEEbxbbbxaeaabbxbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fep_A_1721fep   A     MSESELENOMETHIONINE N - 176
1fep_A_1721fep   A     MSESELENOMETHIONINE F - 177
1fep_A_1721fep   A     MSESELENOMETHIONINE S - 178
1fep_A_1721fep   A     MSESELENOMETHIONINE R - 190
1fep_A_1721fep   A     MSESELENOMETHIONINE L - 191
1fep_A_1721fep   A     MSESELENOMETHIONINE Y - 192

Clusters included in this Subclass
CLUSTER: HA.3.278