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Information on SUBCLASS 4.39.1
Subclass Accession number: 6326
Subclass: 4.39.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 17.9 +/- 15.2
Average RMSD (Å) : 1.100 +/- 0.400

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXppDGXh
(φψ)-conformation: bbaplebb
Pattern: [ILY]x[CGV]x[CNY][DTY][EQY][D][G][NPV][LVY][QWY]x
Conservation:-0.179-0.578-0.749-0.135-0.578-0.692-0.1792.0432.043-0.863-0.2930.162-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f3d_H_881f3d   H90101YYCANDYDGVYW.EEEEE-TTS-EE.bbbbbaxlebbb.
1fgk_A_5471fgk   A547559LLGACTQDGPLYVEEEEE-SSSS-EExaebbaxlexxbb
1izn_A_1851izn   A194206IQVHYYEDGNVQLEEEEE-SSS-EEEbbbbbaxlebbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f3d_H_881f3d   H     TPM2-(4-AMINOBENZYLAMINO)-3,4,5,6-TETRAHYDROPYRIDINIUM A - 93
1f3d_H_881f3d   H     TPM2-(4-AMINOBENZYLAMINO)-3,4,5,6-TETRAHYDROPYRIDINIUM N - 94
1f3d_H_881f3d   H     TPM2-(4-AMINOBENZYLAMINO)-3,4,5,6-TETRAHYDROPYRIDINIUM D - 95
1f3d_H_881f3d   H     TPM2-(4-AMINOBENZYLAMINO)-3,4,5,6-TETRAHYDROPYRIDINIUM G - 98
1f3d_H_881f3d   H     TPM2-(4-AMINOBENZYLAMINO)-3,4,5,6-TETRAHYDROPYRIDINIUM V - 99

Clusters included in this Subclass
CLUSTER: HA.5.228