Information on SUBCLASS 5.1.1 |
Subclass Accession number: 6340
Subclass: 5.1.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 116 Average sequence ID (%) : 15.0 +/- 16.5 Average RMSD (Å) : 0.550 +/- 0.189 Consensus geometry
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Consensus Sequence: | XXpXpcpXX |
(φψ)-conformation: | bbpaagpbb |
Pattern: | x | x | [adegknqrst] | [dehknpqrst] | [adegknqrst] | [degknq] | [adegknqrst] | x | x | x | x |
Conservation: | -0.683 | -0.512 | 0.754 | 0.233 | 0.367 | 2.423 | 0.373 | -0.711 | -0.389 | -1.180 | -0.675 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
189l_*_14 | 189l | - | 18 | 28 | YKDTEGYYTIG | EE-SS--EEEE | bxxaavxpbbe |
1a1n_A_94 | 1a1n | A | 102 | 112 | DLGPDGRLLRG | EE-TTSSEEEE | bbxaavxpabb |
1agd_A_94 | 1agd | A | 102 | 112 | DVGPDGRLLRG | EE-TTS-EEEE | bbxaavxpabb |
1apa_*_226 | 1apa | - | 233 | 243 | LKNANGSKWIV | EE-TTS-EEEE | bbbaagxpbbb |
1br9_*_17 | 1br9 | - | 32 | 42 | GNDIYGNPIKR | EE-TTS-EEEE | ebxaavxpbxb |
1c3m_A_41 | 1c3m | A | 48 | 57 | YKDKDNIEYH. | EE-TT--EEE. | bbxaavxxbb. |
1c8u_A_258 | 1c8u | A | 265 | 275 | FYTQDGVLVAS | EEETT--EEEE | bbxaavxxabb |
1ckq_A_94 | 1ckq | A | 97 | 107 | VKDDYGEWRVV | EE-TTS-EEEE | bxxaavxxbxa |
1cqq_A_52 | 1cqq | A | 62 | 72 | LYNKNGIKLEI | EE-TTS-EEEE | xbxaavxxavb |
1cv8_*_119 | 1cv8 | - | 128 | 138 | AKLNNGQEVII | EEETTS-EEEE | bbxaavxbbbx |
1d6a_A_222 | 1d6a | A | 229 | 239 | LVDASGAKWIV | EE-TTS-EEEE | bbxaavxxbxb |
1dd9_A_203 | 1dd9 | A | 208 | 218 | IRDKRGRVIGF | EE-TTS-EEEE | xbxaavxxabb |
1dix_A_158 | 1dix | A | 162 | 172 | NVDQSGNSQLY | EE-TTS-EEEE | bbxaavxxbxa |
1e1a_A_174 | 1e1a | A | 180 | 190 | RHMNDGRPYQL | EE-TTS-EEEE | bbxaavxxabb |
1e1o_A_120 | 1e1o | A | 128 | 138 | FKTQTGELSIH | EE-TT--EEEE | bbxaavxxbbx |
1ecs_A_90 | 1ecs | A | 95 | 105 | ELQGWGGTMAA | EE-TTSSEEEE | bpxaNgxbbbb |
1eg7_A_1258 | 1eg7 | A | 1260 | 1270 | VQTLENTPAFI | EEETT--EEEE | bbxaavxwbbb |
1ei5_A_486 | 1ei5 | A | 493 | 503 | RRDDKGEITGL | EE-TTS-EEEE | bbxaavxxaeb |
1eyl_A_145 | 1eyl | A | 154 | 164 | HRDRNGNRRLV | EE-TT--EEEE | bxxaavxxxxb |
1f1s_A_223 | 1f1s | A | 229 | 239 | ISDKSGKIIKE | EE-TT--EEEE | bbbaavxxabb |
1f5m_A_131 | 1f5m | A | 137 | 147 | IISNDGKTLGV | EE-TTS-EEEE | bxxaavbxaeb |
1f86_A_29 | 1f86 | A | 34 | 44 | RKAADDTWEPF | EE-TTS-EEEE | bxxaavbxxwa |
1ffv_B_311 | 1ffv | B | 318 | 328 | AATPDGKILGL | EE-TT--EEEE | bbbaagxxabb |
1fso_A_173 | 1fso | A | 181 | 191 | FTDDDKTDHLS | EE-TT--EEEE | bbbaavpxabb |
1gpl_*_414 | 1gpl | - | 422 | 432 | VETNVGKQFNF | EE-TTS-EEEE | bbxaavxbbxb |
1gzq_A_236 | 1gzq | A | 236 | 246 | LPNANWTWYLR | EEETTTEEEEE | xxbaavbbbbb |
1h16_A_543 | 1h16 | A | 547 | 557 | IRDEDGLAIDF | EE-TTS-EEEE | bbxaavxxabb |
1h3q_A_5 | 1h3q | A | 9 | 19 | IVGHHDNPVFE | EE-TTS-EEEE | bbxaavbxabb |
1h4r_A_220 | 1h4r | A | 224 | 234 | IRNKKGTELLL | EEETT--EEEE | bbxaavxxbbx |
1h6h_A_38 | 1h6h | A | 45 | 55 | VKTKGGSKYLI | EEETTS-EEEE | bbbaavxbbbb |
1hc7_A_210 | 1hc7 | A | 216 | 226 | ALMKDGKALQA | EE-TTS-EEEE | bbxaavbxbxa |
1hdm_B_5 | 1hdm | B | 12 | 22 | LLDDAGTPKDF | EE-TTS-EEEE | bbxaavxwabb |
1hnf_*_79 | 1hnf | - | 85 | 95 | IYDTKGKNVLE | EEETTS-EEEE | bbxaavxxabb |
1hpl_A_415 | 1hpl | A | 422 | 432 | VERNDGSVFNF | EE-TTS-EEEE | bbxaavxbbbb |
1hsb_A_94 | 1hsb | A | 102 | 112 | DVGSDGRFLRG | EE-TTS-EEEE | bbxaavxpabb |
1i4f_A_94 | 1i4f | A | 102 | 112 | DVGSDWRFLRG | EE-TTSSEEEE | bbxaavbpabb |
1i4u_A_63 | 1i4u | A | 69 | 79 | GIAYDGNLLKR | EEETTS-EEEE | ebxaavxpbbb |
1ifr_A_526 | 1ifr | A | 530 | 540 | LINSTGEEVAM | EE-TTS-EEEE | xbxaavxxabb |
1iic_A_311 | 1iic | A | 316 | 326 | VEQPDGKITDF | EE-TTS-EEEE | bbxaavxxabb |
1iiu_A_114 | 1iiu | A | 122 | 132 | ELNEDGTCADS | EE-TTSBEEEE | bxxaavxxabb |
1iq6_A_108 | 1iq6 | A | 115 | 125 | IFTQGGALAVT | EE-TTS-EEEE | bbxaavxxabb |
1itw_A_433 | 1itw | A | 437 | 447 | VTDESGKLLLE | EEETT--EEEE | bbxaavxxabb |
1iwm_A_128 | 1iwm | A | 129 | 139 | KLDDQYRLSEI | EE-TTS-EEEE | bbxaalbpabb |
1iwm_A_59 | 1iwm | A | 64 | 74 | LTNPLGSTELE | EE-TTS-EEEE | bbxaagxxabb |
1iyb_A_157 | 1iyb | A | 161 | 171 | NVDESGNSQLY | EE-TT--EEEE | bbxaavxxbxa |
1iyk_A_316 | 1iyk | A | 321 | 331 | VEDENGIITDY | EE-TTS-EEEE | bbxaavxxabb |
1j19_A_204 | 1j19 | A | 208 | 218 | IKNKKGTELWL | EEESS--EEEE | bbxaaNxxbbb |
1j1q_A_221 | 1j1q | A | 228 | 238 | LKNADGTKWIV | EE-TTS-EEEE | bbxaavxxbxb |
1j1t_A_121 | 1j1t | A | 128 | 138 | LRNTSGNEEKF | EEBTTS-EEEE | bxxaavbxbbb |
1j9j_A_182 | 1j9j | A | 190 | 200 | RVSPFGEKYYW | EE-TTS-EEEE | bbxaavxxbbb |
1jiw_I_67 | 1jiw | I | 70 | 80 | LLERGGLTLML | EE-TTS-EEEE | xbxaagxxabb |
1jof_A_120 | 1jof | A | 125 | 135 | SVSETGKLEKN | EE-TT--EEEE | xbxaavxpabx |
1jof_A_283 | 1jof | A | 288 | 298 | KLRDCGSIEKQ | EE-TTS-EEEE | bbxaagxxabx |
1jov_A_107 | 1jov | A | 114 | 124 | LFSDLNIIEAK | EE-TTS-EEEE | bbxaavbpabb |
1jvw_A_88 | 1jvw | A | 94 | 104 | GRLRDGTVFDS | EE-TTS-EEEE | bbxaavpxabb |
1jwy_A_251 | 1jwy | A | 257 | 267 | QFNSAGFISGA | EE-TTS-EEEE | xbxaavxxaeb |
1k8d_A_94 | 1k8d | A | 102 | 112 | DMGSDGRLLRG | EE-TTSSEEEE | bbxaavxxaeb |
1kgi_A_29 | 1kgi | A | 34 | 44 | KKTADGSWEPF | EE-TTS-EEEE | bxxaavxxbwa |
1kjv_A_94 | 1kjv | A | 102 | 112 | DVGSDGSLLRG | EE-TTS-EEEE | bbxaavxxabb |
1kk8_A_244 | 1kk8 | A | 250 | 260 | HFGPTGKIAGA | EE-TTSSEEEE | xbxaavbpaeb |
1kt7_A_114 | 1kt7 | A | 122 | 132 | LLNLDGTCADS | EE-TTSBEEEE | bxxaavxxabb |
1kwg_A_549 | 1kwg | A | 549 | 559 | LTFQDGKGALY | EEETTS-EEEE | bbxaavxxabb |
1l1n_A_52 | 1l1n | A | 62 | 72 | LEDQAGTNLEI | EE-TTS-EEEE | xbxaavxxavb |
1l6m_A_53 | 1l6m | A | 57 | 67 | ELKEDKSYNVT | EE-TTS-EEEE | aexaavxbxbb |
1lk2_A_94 | 1lk2 | A | 102 | 112 | EVGSDGRLLRG | EE-TTS-EEEE | bbxaavxpabb |
1lqv_A_93 | 1lqv | A | 102 | 112 | ELPPEGSRAHV | EE-SS----EE | bbxaagxxpxb |
1lrz_A_39 | 1lrz | A | 45 | 55 | IKNNNNEVIAA | EE-TTS-EEEE | bbxaavxxabb |
1m6o_A_94 | 1m6o | A | 102 | 112 | DVGPDGRLLRG | EE-TT--EEEE | bbxaavxpabb |
1m8a_A_36 | 1m8a | A | 39 | 49 | FHTKKKLSVCA | EEETT--EEEE | xbbaavxbbpb |
1m98_A_286 | 1m98 | A | 293 | 303 | LLNPENKVFFV | EE-TTS-EEEE | bbxaalbxabb |
1mhc_A_94 | 1mhc | A | 102 | 112 | EVGPDMRLLGA | EE-TTS-EEEE | bbxaaUxxaeb |
1mkm_A_194 | 1mkm | A | 201 | 211 | IFDHNGYPVAG | EE-TTS-EEEE | bbxaavxwabb |
1mo9_A_277 | 1mo9 | A | 282 | 292 | EEDANGRVQAV | EE-TTSBEEEE | xbxaavbpabb |
1n1t_A_194 | 1n1t | A | 200 | 210 | IADMGGRVFTK | EEETTS-EEEE | bbxaagxbbbb |
1n62_B_314 | 1n62 | B | 321 | 331 | AATKDGKILAM | EE-TT--EEEE | bbxaavxxabb |
1n67_A_503 | 1n67 | A | 511 | 521 | GYNSNIIWRSM | EE-TT---EEE | exbaalxxbbb |
1n6c_A_90 | 1n6c | A | 97 | 107 | EYDTDGRLIFK | EE-TT--EEEE | bbxaavxxabb |
1n8q_A_449 | 1n8q | A | 455 | 465 | FLKNDGTLRPL | EE-TTS-EEEE | bxxaavxbbxa |
1n9l_A_96 | 1n9l | A | 106 | 116 | IKTPDGRVSKF | EE-TTS-EEEE | bbxaavxxabb |
1ne9_A_40 | 1ne9 | A | 46 | 56 | LEDDQGAIIAA | EE-TTS-EEEE | bbxaavxxabb |
1nep_A_104 | 1nep | A | 111 | 121 | LTDDKNQRFFC | EE-TTS-EEEE | bbbaavxxabb |
1now_A_180 | 1now | A | 180 | 190 | YQDSYGTFTIN | EE-TTS-EEEE | bbxaavxxbbx |
1npu_A_31 | 1npu | A | 36 | 46 | RLSPSNQTEKQ | EE-TTS-EEEE | bxxaalbxbxa |
1ob3_A_16 | 1ob3 | A | 21 | 31 | AQNNYGETFAL | EEETTS-EEEE | bbxaavxxbxb |
1ocv_A_98 | 1ocv | A | 102 | 112 | RFNGAGKVVSM | EE-TTS-EEEE | bbxaavxxabb |
1ofz_A_73 | 1ofz | A | 80 | 90 | CVNKDNILSEF | EE-TT-BEEEE | bbxaalbpbbb |
1ojj_A_266 | 1ojj | A | 273 | 283 | LANRRGKLEKI | EE-TTS-EEEE | xbxaavxxabb |
1os8_A_198 | 1os8 | A | 201 | 211 | RKDNADEWIQV | EE-TTS-EEEE | bxxaalbxbxa |
1osp_O_121 | 1osp | O | 125 | 135 | KFNEKGEVSEK | EE-TTS-EEEE | bbbaavbxabb |
1oyg_A_311 | 1oyg | A | 317 | 327 | ELNDDYTLKKV | EE-TTSSEEEE | xbxaavxxabx |
1pbk_*_130 | 1pbk | - | 137 | 147 | GTLQDGTVFDT | EE-TTS-EEEE | bbxaagxxabb |
1pqm_A_14 | 1pqm | A | 18 | 28 | YKDTEGYYTIG | EE-TTS-EEEE | bbxaavxxbbe |
1psu_A_107 | 1psu | A | 114 | 124 | IVNQQQKTVAL | EE-TTS-EEEE | bbxaavxxabb |
1q4t_A_122 | 1q4t | A | 129 | 139 | LRDDAGRLCAV | EE-TT--EEEE | bbxaavxxabb |
1q6h_A_141 | 1q6h | A | 148 | 158 | GTLIDGKEFDN | EEETTS-EEEE | bbxaagxxabb |
1qme_A_79 | 1qme | A | 79 | 89 | IYDRNGVPIAE | EE-TTS-EEEE | bbxaavxwabb |
1qo3_A_94 | 1qo3 | A | 102 | 112 | DVESDGRLLRG | EE-TTS-EEEE | bbxaagxxabb |
1r17_A_349 | 1r17 | A | 349 | 359 | IKDNSGEIIAT | EEETT--EEEE | xbxaagxxabb |
1s5u_A_89 | 1s5u | A | 96 | 106 | IVNAENTLLNE | EE-TT--EEEE | bbxaavxxabb |
1sc0_A_111 | 1sc0 | A | 118 | 128 | IRTEENKLCCV | EE-TTS-EEEE | bbxaavbxabb |
1smp_I_64 | 1smp | I | 67 | 77 | LTQADGSAVAF | EE-TTS-EEEE | xbxaavxxabb |
1svp_A_115 | 1svp | A | 118 | 128 | VKNEDGDVIGH | EE-TTS-EEEE | bbxaavxxaeb |
1svp_A_239 | 1svp | A | 246 | 256 | TWNSKGKTIKT | EE-TT--EEEE | bbxaavxxbbb |
1ub5_A_36 | 1ub5 | A | 40 | 50 | RQIPEKRLEWV | EE-TT---EEE | bbbaavbpbxa |
1uds_A_185 | 1uds | A | 190 | 200 | VGTGSGRLSEV | EEETTS-EEEE | bbbaavxbabb |
1ule_A_37 | 1ule | A | 41 | 51 | FLSAGENILLH | EE-TT--EEEE | bbxaavxxabb |
1uol_A_251 | 1uol | A | 257 | 267 | LEDSSGNLLGR | EE-TTS-EEEE | xbxaavxxabb |
1usr_A_473 | 1usr | A | 477 | 487 | IFYRNHTLRGV | EE-TTS-EEEE | bbxaavxxabb |
1ute_A_283 | 1ute | A | 287 | 297 | YIEASGKSLFK | EEETTS-EEEE | xbxaavxxabb |
1vh5_A_111 | 1vh5 | A | 118 | 128 | IFDEKGRLCCS | EE-TTS-EEEE | bbxaavxxabb |
1vh9_A_111 | 1vh9 | A | 118 | 128 | VFDEQGRRCCT | EE-TTS-EEEE | bbxaavxxabb |
1vhs_A_52 | 1vhs | A | 55 | 65 | AEDENGNVAAW | EE-TTS-EEEE | bbxaavxxabb |
2acy_*_36 | 2acy | - | 40 | 50 | QNTDQGTVQGQ | EE-TTS-EEEE | bxbaavbbbeb |
2sak_*_24 | 2sak | - | 31 | 41 | GVDSKGNELLS | EE-TT--EEEE | xbxaavxxabx |
3fru_A_91 | 3fru | A | 99 | 109 | ELAPDNSSLPT | EE-TTS-EEEE | bxxaavxxbwb |
3ovw_A_266 | 3ovw | A | 273 | 283 | VANKQGDLIEL | EE-TTS-EEEE | xbxaavxxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1cv8_*_119 | 1cv8 | * | NULCATALYTIC TRIAD. | H - 120 |
1e1a_A_174 | 1e1a | A | AC1CA BINDING SITE FOR CHAIN A | N - 175 |
1gzq_A_236 | 1gzq | A | AC2NO3 BINDING SITE FOR CHAIN A | W - 243 |
1gzq_A_236 | 1gzq | A | AC3NO3 BINDING SITE FOR CHAIN A | R - 246 |
1ofz_A_73 | 1ofz | A | AC1FUL BINDING SITE FOR CHAIN A | I - 76 |
1ofz_A_73 | 1ofz | A | AC2AFL BINDING SITE FOR CHAIN A | R - 77 |
1ofz_A_73 | 1ofz | A | AC2AFL BINDING SITE FOR CHAIN A | E - 89 |
1ofz_A_73 | 1ofz | A | AC1FUL BINDING SITE FOR CHAIN A | Y - 92 |
1uol_A_251 | 1uol | A | MUAMUTATION SITE FOR CHAIN A | D - 268 |
1usr_A_473 | 1usr | A | AC3NDG BINDING SITE FOR CHAIN A | Y - 479 |
Clusters included in this Subclass |
CLUSTER: HA.3.280 |
CLUSTER: HA.4.25 |
CLUSTER: HA.4.37 |
CLUSTER: HA.5.11 |
CLUSTER: HA.5.21 |
CLUSTER: HA.6.128 |
CLUSTER: HA.6.16 |
CLUSTER: HA.6.17 |
CLUSTER: HA.6.18 |