Information on SUBCLASS 5.1.6 |
Subclass Accession number: 6345
Subclass: 5.1.6 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 20 Average sequence ID (%) : 23.5 +/- 24.9 Average RMSD (Å) : 0.440 +/- 0.204 Consensus geometry
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Consensus Sequence: | XhXXpGpXh |
(φψ)-conformation: | bbpaagpbb |
Pattern: | x | [gikltv] | [dgnstv] | [aeknrs] | [ADEKNQRS] | [DGNS] | [dekrt] | x | [cfiltvy] |
Conservation: | -1.211 | -0.166 | -0.040 | -0.158 | 0.352 | 2.275 | 0.348 | -0.898 | -0.502 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b56_*_73 | 1b56 | - | 75 | 83 | ETTADGRKT | EE-TTS-EE | bxxaavxbb |
1cv8_*_156 | 1cv8 | - | 157 | 165 | IPVSNGDHY | EE-TTS-EE | xwbaavxbb |
1dgf_A_220 | 1dgf | A | 222 | 230 | LVNANGEAV | EE-TTS-EE | bbxaavxbb |
1e93_A_199 | 1e93 | A | 201 | 209 | FINKDNERF | EE-TT--EE | bbxaavxbb |
1fdq_A_70 | 1fdq | A | 72 | 80 | ETTADDRNC | EE-TT--EE | bbxaavbxb |
1fp3_A_361 | 1fp3 | A | 361 | 369 | YLNREGKVA | EE-TTS-EE | bbxaavxxa |
1gvp_*_14 | 1gvp | - | 18 | 26 | GVSRQGKPY | EE-TTS-EE | ebpaagxwb |
1gwe_A_205 | 1gwe | A | 207 | 215 | WVNAQGEKH | EE-TT--EE | bbxaavxbb |
1hms_*_70 | 1hms | - | 72 | 80 | ETTADDRKV | EE-TT--EE | bbxaavxbb |
1kqf_A_146 | 1kqf | A | 147 | 155 | EKNEQGVTV | EE-TTS-EE | abxaavxxa |
1lid_*_70 | 1lid | - | 72 | 80 | EITADDRKV | EE-TT--EE | bbxaavxbb |
1m7s_A_222 | 1m7s | A | 224 | 232 | LVNAKGEVH | EE-TTS-EE | xbxaavxbb |
1o8v_A_71 | 1o8v | A | 73 | 81 | EVTPDSREV | EE-TT--EE | bbxaavxxb |
1oj5_A_328 | 1oj5 | A | 330 | 338 | FILNDGTML | EE-TTS-EE | bbxaavxxb |
1p80_A_277 | 1p80 | A | 279 | 287 | LINAEGKAT | EE-TT--EE | bbxaavxbb |
1pgu_A_80 | 1pgu | A | 83 | 91 | SGDESGKVI | EEETTSEEE | bbbaavbbb |
1qng_A_45 | 1qng | A | 45 | 53 | KIGSRGKNL | EE-TTSSEE | bbxaavxxp |
1qwl_A_201 | 1qwl | A | 203 | 211 | LINAKGERF | EE-TT--EE | bbxaavxbb |
1si8_A_199 | 1si8 | A | 201 | 209 | WVNAAGEVF | EE-TT--EE | bbxaavxbb |
4blc_A_219 | 4blc | A | 221 | 229 | LVNADGEAV | EE-TT--EE | bbxaavxxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1o8v_A_71 | 1o8v | A | AC2PLM BINDING SITE FOR CHAIN A | D - 77 |
1o8v_A_71 | 1o8v | A | AC2PLM BINDING SITE FOR CHAIN A | R - 79 |
1oj5_A_328 | 1oj5 | A | AC2IOD BINDING SITE FOR CHAIN A | H - 341 |
1oj5_A_328 | 1oj5 | A | AC2IOD BINDING SITE FOR CHAIN A | R - 343 |
Clusters included in this Subclass |
CLUSTER: HA.4.71 |
CLUSTER: HA.4.76 |
CLUSTER: HA.5.50 |