Information on SUBCLASS 5.1.12 |
Subclass Accession number: 6351
Subclass: 5.1.12 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.11 (>50 %) 1.11.1 (>50 %) 1.11.1.6 GO : GO:0004096 (>50 %) GO:0004601 (>50 %) GO:0016684 (>50 %) SCOP : 56633 (>50 %) 56634 (>50 %) 56635 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 21.1 +/- 19.3 Average RMSD (Å) : 0.633 +/- 0.231 Consensus geometry
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Consensus Sequence: | hXXXcGpXX |
(φψ)-conformation: | bbpaagpbb |
Pattern: | [FIY] | [KV] | [LW] | x | x | x | [DN] | [G] | [DEQ] | x | [HLV] | [PY] | [CTV] | x | [FV] | [HR] | x | [KV] | [NT] |
Conservation: | 0.213 | -0.348 | 0.058 | -1.099 | -0.407 | -0.689 | 1.247 | 2.918 | 0.459 | -0.771 | -1.017 | 0.193 | -0.361 | -0.853 | -0.043 | 1.311 | -1.017 | -0.348 | 0.553 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a4e_A_217 | 1a4e | A | 217 | 235 | YKWSNKNGDWHYVQVHIKT | EEEE-TTS-EEEEEEEEEE | bbbbxaagxbbxbbbbbxx |
1feu_A_56 | 1feu | A | 57 | 75 | IVLELPDGQSLPTLVRQVN | EEEE-TTS-EEEEEEEEEE | bxxxxaavxbbwbbxabbx |
4blc_A_219 | 4blc | A | 219 | 237 | FKLVNADGEAVYCKFHYKT | EEEE-TT--EEEEEEEEEE | bbbbxaavxxbxbbbbbxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1feu_A_56 | 1feu | A | CDCADMIUM ION | V - 56 |
4blc_A_219 | 4blc | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | H - 234 |
4blc_A_219 | 4blc | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | K - 236 |
Clusters included in this Subclass |
CLUSTER: HA.5.171 |