Logo
Information on SUBCLASS 5.2.4
Subclass Accession number: 6356
Subclass: 5.2.4 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 8.9 +/- 11.6
Average RMSD (Å) : 0.482 +/- 0.098

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XhpXpXppX
(φψ)-conformation: bbpaalabb
Pattern: x[aflmpt][DHKNST]x[CDENSTW]x[dekrs][ehknst]x[AFGILVY]
Conservation:-1.7240.1571.880-0.1340.395-0.7881.0610.018-0.728-0.137
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ayx_*_2051ayx   -205214GFDLWEENQGEE-TTS--EEbxxaavabbe
1f6w_A_661f6w   A6675QATITQDSTYEE-TTSSSEEbxxaalabbb
1ioo_A_1621ioo   A169178CFTPNADSMFEE-TTSSSEEbbxaavabxb
1iqq_A_1611iqq   A170179CSDKSGEHFIEE-TTSSSEEbbxaavabxb
1l1l_A_4021l1l   A404413GTNPCGEISLEE-TT--SEEbbxaavabxb
1nzi_A_1481nzi   A148157FLHDDMKNCGEE-TTSS-EEbxxaavabbb
1oke_A_3371oke   A339348IMDLEKRHVLEE-TTSSSEEbbxaavabxa
1osp_O_961osp   O101110VFKEDGKTLVEE-TTSSSEEbbxaalaxxa
1qwk_A_1181qwk   A118127AFNDDMSEHIEE-TTS-SEExbxaalabxb
1qzq_A_4951qzq   A499508RPSPDFSKIAEE-TTSSEEEbxxaavabba
1uzp_A_15181uzp   A15181527ELNPTRVGCVEE-TTSSBEEbxxaavabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ayx_*_2051ayx   *     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL L - 208
1ayx_*_2051ayx   *     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL W - 209
1ayx_*_2051ayx   *     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL E - 210
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ayx_*_2051ayx   * NULENZYME ACTIVE SITE AND TWO CATALYTIC CARBOXYLATES.E - 210

Clusters included in this Subclass
CLUSTER: HA.5.61
CLUSTER: HA.7.33