Logo
Information on SUBCLASS 5.2.6
Subclass Accession number: 6358
Subclass: 5.2.6 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 5.3 +/- 7.7
Average RMSD (Å) : 1.533 +/- 0.153

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: pXpXpcpXh
(φψ)-conformation: bbpaalabb
Pattern: [FIV][GQT]x[AFV][KSY]x[NS][DEW][DNS][GK][ERS][IKV][ILM]xx[AET][AGT][FVW]x
Conservation:0.915-0.941-1.095-0.631-0.631-0.7862.152-0.0131.2240.878-0.013-0.4771.688-0.631-1.714-0.322-0.1670.4510.111
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1i19_A_731i19   A7391FQQAYQNWSKEIMLDATWVEEEEEE-TTSSSEEEEEEEbxbxbbxaavabbbabbxb
1ojq_A_1871ojq   A191209VGSVKLSDNKRKIIITAVVEEEEEE-SSSSSEEEEEEExabbbxpaavabbbbxbbx
1ri6_A_2541ri6   A255273ITVFSVSEDGSVLSKEGFQEEEEEE-TTS--EEEEEEEbxxbbbxaavabxbxaebb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1i19_A_731i19   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 77
1i19_A_731i19   A     EDO1,2-ETHANEDIOL W - 80
1i19_A_731i19   A     FADFLAVIN-ADENINE DINUCLEOTIDE W - 80
1i19_A_731i19   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 81
1i19_A_731i19   A     EDO1,2-ETHANEDIOL E - 83
1i19_A_731i19   A     EDO1,2-ETHANEDIOL I - 84

Clusters included in this Subclass
CLUSTER: HA.7.99