Information on SUBCLASS 5.4.11 |
Subclass Accession number: 6372
Subclass: 5.4.11 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005509 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 7.4 +/- 8.6 Average RMSD (Å) : 1.233 +/- 0.321 Consensus geometry
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Consensus Sequence: | XXXppGXXX |
(φψ)-conformation: | pbpaalppa |
Pattern: | [AGY] | [SY] | x | [HST] | [AMV] | [EHN] | x | [ILT] | x | [EKY] | [NQT] | [G] | [DNV] | x | x | [AP] | [EST] | [AFK] | [KTV] | [KLV] | x | [ATV] | x | x | [SV] | [FIT] | x |
Conservation: | -0.400 | 1.226 | -0.593 | 0.181 | 0.181 | 0.956 | -0.400 | 0.181 | -0.496 | -0.012 | 0.278 | 4.150 | -0.496 | -0.496 | -0.593 | 0.754 | 0.278 | -0.787 | -0.303 | -0.400 | -0.690 | 0.181 | -0.787 | -1.174 | 0.059 | -0.206 | -0.593 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1coy_*_261 | 1coy | - | 261 | 287 | YSVTMEQIDEQGNVVATKVVTADRVFF | EEEEEEEE-TTS-EEEEEEEEEEEEEE | bxbxbxxbxaavxxabbbbbbbabbbx |
1ex0_A_547 | 1ex0 | A | 551 | 577 | AYLSANITFYTGVPKAEFKKETFDVTL | EEEEEEEE-TTS-EEEEEEEEEEEEEE | bbbbbbxbxaavxxabxabbbbbxbbb |
1qas_A_729 | 1qas | A | 729 | 755 | GYRHVHLLSKNGDQHPSATLFVKISIQ | EEEEEEEE-TTS-EEEEEEEEEEEEEE | exbbxxxbxaavxxxaaxbbxbbbbbb |
Clusters included in this Subclass |
CLUSTER: HA.4.237 |