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Information on SUBCLASS 5.22.1
Subclass Accession number: 6401
Subclass: 5.22.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 19.5 +/- 23.8
Average RMSD (Å) : 0.817 +/- 0.440

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: cphXXXchX
(φψ)-conformation: bbaabblbb
Pattern: [ekqt][vy]x[CDST][ilpv]x[EFK][KPT][DGN][CIV][fpt]xx
Conservation:-0.752-0.006-0.3390.092-0.677-1.211-0.3000.5441.9691.543-0.862-1.000-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fgy_A_3141fgy   A317329EVLDPRKPNCFELEE--SS-SSEEEExbbbaaxxlbbbx
1jsd_A_151jsd   A1525TVDTLTETNVP..EE--SS-SSEE..bbbbaabblxx..
1jsm_A_151jsm   A1525QVDTIMEKNVT..EE--SS-S-EE..bbbbaabblxx..
1qw9_A_3961qw9   A396406KYDSKDFTDVP..EE--SS-SSEE..bbbbaabblxx..
1rl4_A_1491rl4   A153165IEGCLSFPGIEGKEE--TTSTT--EExbbbaabpvbbbx
1rvx_A_191rvx   A1929TVDTVLEKNVT..EE--SS-SSEE..bbbbaabblxx..
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fgy_A_3141fgy   A     MSESELENOMETHIONINE I - 315
1fgy_A_3141fgy   A     MSESELENOMETHIONINE R - 316
1fgy_A_3141fgy   A     MSESELENOMETHIONINE E - 317
1fgy_A_3141fgy   A     MSESELENOMETHIONINE C - 326
1fgy_A_3141fgy   A     MSESELENOMETHIONINE F - 327
1jsm_A_151jsm   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 15
1jsm_A_151jsm   A     NAGN-ACETYL-D-GLUCOSAMINE D - 17
1jsm_A_151jsm   A     NAGN-ACETYL-D-GLUCOSAMINE K - 22
1jsm_A_151jsm   A     NAGN-ACETYL-D-GLUCOSAMINE N - 23
1rl4_A_1491rl4   A     BL52-{N'-[2-(5-AMINO-1-PHENYLCARBAMOYL-PENTYLCARBAMOYL)-HEXYL]-HYDRAZINOMETHYL}-HEXANOIC ACID(5-AMINO-1-PHENYLCARBAMOYL-PENTYL)-AMIDE L - 150
1rl4_A_1491rl4   A     BL52-{N'-[2-(5-AMINO-1-PHENYLCARBAMOYL-PENTYLCARBAMOYL)-HEXYL]-HYDRAZINOMETHYL}-HEXANOIC ACID(5-AMINO-1-PHENYLCARBAMOYL-PENTYL)-AMIDE K - 151
1rl4_A_1491rl4   A     BL52-{N'-[2-(5-AMINO-1-PHENYLCARBAMOYL-PENTYLCARBAMOYL)-HEXYL]-HYDRAZINOMETHYL}-HEXANOIC ACID(5-AMINO-1-PHENYLCARBAMOYL-PENTYL)-AMIDE L - 152
1rl4_A_1491rl4   A     BRR(2R)-2-{[FORMYL(HYDROXY)AMINO]METHYL}HEXANOIC ACID I - 153
1rl4_A_1491rl4   A     BL52-{N'-[2-(5-AMINO-1-PHENYLCARBAMOYL-PENTYLCARBAMOYL)-HEXYL]-HYDRAZINOMETHYL}-HEXANOIC ACID(5-AMINO-1-PHENYLCARBAMOYL-PENTYL)-AMIDE I - 153
1rl4_A_1491rl4   A     BRR(2R)-2-{[FORMYL(HYDROXY)AMINO]METHYL}HEXANOIC ACID E - 154
1rl4_A_1491rl4   A     BL52-{N'-[2-(5-AMINO-1-PHENYLCARBAMOYL-PENTYLCARBAMOYL)-HEXYL]-HYDRAZINOMETHYL}-HEXANOIC ACID(5-AMINO-1-PHENYLCARBAMOYL-PENTYL)-AMIDE E - 154
1rl4_A_1491rl4   A     COCOBALT (II) ION G - 155
1rl4_A_1491rl4   A     BRR(2R)-2-{[FORMYL(HYDROXY)AMINO]METHYL}HEXANOIC ACID G - 155
1rl4_A_1491rl4   A     BL52-{N'-[2-(5-AMINO-1-PHENYLCARBAMOYL-PENTYLCARBAMOYL)-HEXYL]-HYDRAZINOMETHYL}-HEXANOIC ACID(5-AMINO-1-PHENYLCARBAMOYL-PENTYL)-AMIDE G - 155
1rl4_A_1491rl4   A     COCOBALT (II) ION C - 156
1rl4_A_1491rl4   A     BRR(2R)-2-{[FORMYL(HYDROXY)AMINO]METHYL}HEXANOIC ACID C - 156
1rl4_A_1491rl4   A     COCOBALT (II) ION L - 157
1rl4_A_1491rl4   A     BRR(2R)-2-{[FORMYL(HYDROXY)AMINO]METHYL}HEXANOIC ACID L - 157
1rl4_A_1491rl4   A     COCOBALT (II) ION S - 158
1rl4_A_1491rl4   A     BRR(2R)-2-{[FORMYL(HYDROXY)AMINO]METHYL}HEXANOIC ACID S - 158
1rl4_A_1491rl4   A     BL52-{N'-[2-(5-AMINO-1-PHENYLCARBAMOYL-PENTYLCARBAMOYL)-HEXYL]-HYDRAZINOMETHYL}-HEXANOIC ACID(5-AMINO-1-PHENYLCARBAMOYL-PENTYL)-AMIDE E - 163
1rl4_A_1491rl4   A     BL52-{N'-[2-(5-AMINO-1-PHENYLCARBAMOYL-PENTYLCARBAMOYL)-HEXYL]-HYDRAZINOMETHYL}-HEXANOIC ACID(5-AMINO-1-PHENYLCARBAMOYL-PENTYL)-AMIDE K - 165
1rvx_A_191rvx   A     NAGN-ACETYL-D-GLUCOSAMINE T - 19
1rvx_A_191rvx   A     NAGN-ACETYL-D-GLUCOSAMINE D - 21
1rvx_A_191rvx   A     NAGN-ACETYL-D-GLUCOSAMINE K - 26
1rvx_A_191rvx   A     NAGN-ACETYL-D-GLUCOSAMINE N - 27

Clusters included in this Subclass
CLUSTER: HA.6.85
CLUSTER: HA.8.36