Information on SUBCLASS 5.22.1 |
Subclass Accession number: 6401
Subclass: 5.22.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 19.5 +/- 23.8 Average RMSD (Å) : 0.817 +/- 0.440 Consensus geometry
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Consensus Sequence: | cphXXXchX |
(φψ)-conformation: | bbaabblbb |
Pattern: | [ekqt] | [vy] | x | [CDST] | [ilpv] | x | [EFK] | [KPT] | [DGN] | [CIV] | [fpt] | x | x |
Conservation: | -0.752 | -0.006 | -0.339 | 0.092 | -0.677 | -1.211 | -0.300 | 0.544 | 1.969 | 1.543 | -0.862 | -1.000 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fgy_A_314 | 1fgy | A | 317 | 329 | EVLDPRKPNCFEL | EE--SS-SSEEEE | xbbbaaxxlbbbx |
1jsd_A_15 | 1jsd | A | 15 | 25 | TVDTLTETNVP.. | EE--SS-SSEE.. | bbbbaabblxx.. |
1jsm_A_15 | 1jsm | A | 15 | 25 | QVDTIMEKNVT.. | EE--SS-S-EE.. | bbbbaabblxx.. |
1qw9_A_396 | 1qw9 | A | 396 | 406 | KYDSKDFTDVP.. | EE--SS-SSEE.. | bbbbaabblxx.. |
1rl4_A_149 | 1rl4 | A | 153 | 165 | IEGCLSFPGIEGK | EE--TTSTT--EE | xbbbaabpvbbbx |
1rvx_A_19 | 1rvx | A | 19 | 29 | TVDTVLEKNVT.. | EE--SS-SSEE.. | bbbbaabblxx.. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.6.85 |
CLUSTER: HA.8.36 |