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Information on SUBCLASS 5.27.1
Subclass Accession number: 6406
Subclass: 5.27.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 13.3 +/- 14.5
Average RMSD (Å) : 1.060 +/- 0.182

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hXXGpXppp
(φψ)-conformation: bbpgbaabb
Pattern: [emq]x[cfkv][ekps][GS][ES][DPS][GKNST][DGNQS][CKTY][AILV][aent]
Conservation:-0.097-0.692-1.182-0.8392.3871.0380.411-0.189-0.018-0.5500.604-0.874
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gk8_A_831gk8   A8899EPVPGEDNQYIAEE-TT-SS-EEEbxbxvbaabbxx
1hd2_A_131hd2   A1324EVFEGEPGNKVNEEE-SSTT-EEExbbbgbaaxxbx
1k55_A_391k55   A4253VLCKSSSKSCATEEEESSTTSEEEbbbxgbaabbbb
1uxx_X_671uxx   X7081QLRLGSPTGTLIEEEESSTTSEEExbbbgbaaxpxa
2asi_*_2812asi   -286297MQKSGSSSDTIEEEBTT-SS-EEEbppxlbaabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gk8_A_831gk8   A     HYP4-HYDROXYPROLINE R - 83
1gk8_A_831gk8   A     HYP4-HYDROXYPROLINE A - 102

Clusters included in this Subclass
CLUSTER: HA.5.180
CLUSTER: HA.6.108