Logo
Information on SUBCLASS 6.7.1
Subclass Accession number: 6438
Subclass: 6.7.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 15

Average sequence ID (%) : 55.2 +/- 28.3
Average RMSD (Å) : 0.313 +/- 0.385

Consensus geometry
d (Å): 11 delta (°): 135-180 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: chNShXXhXX
(φψ)-conformation: bblbappabb
Pattern: [hi][il][fg][IV][DKN][ILV][KN][CS][iv][aekr][APS][AIKTV][aknrs][ATV][akltv][KPQRS]
Conservation:0.334-0.141-0.6071.6960.6311.0301.6210.7700.035-1.2870.035-1.025-1.2090.313-1.464-0.731
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1avb_A_1281avb   A128143RIEIDVNSIRPIATESEEEEEESSSS-SEEEEbxbbbblbaxpabbbx
1fny_A_1401fny   A140155HLGINVNSIESIKTVPEEEEEESSSS-SEEEEbxbbbbvbaxxabbbx
1fx5_A_1431fx5   A143158HIGIDVNCVKSINAEREEEEEESSSS-SEEEEbbbbbblbaxxabbbx
1g7y_A_1381g7y   A138153HIGIDVNSIKSIRTASEEEEEESSSS-SEEEEbbbbbblbaxpabbbx
1gzc_A_1421gzc   A142157HIGIDVNSIRSIKTQPEEEEEESSSS-SEEEEbxbbbblbaxpabbbx
1h9w_A_241h9w   A2439HIGIDIKSIRSKSTAREEEEEESSSS-SEEEEbbbbbblbaxpabbbp
1led_*_1451led   -145160HIGIDVNSIVSVATTREEEEEESSSS-SEEEEbbbbbbUbaxpabbbp
1loe_A_1361loe   A136151HIGIDVNSIKSINTKSEEEEEESSSS-SEEEEbxbbbblbaxxabbbx
1mvq_A_241mvq   A2439HIGINIKSIRSKATTREEEEEESSSS-SEEEEbbbbbbvbaxpabbbp
1nls_*_241nls   -2439HIGIDIKSVRSKKTAKEEEEEESSSS-SEEEEbbbbbbvbaxpabbbx
1qnw_A_1441qnw   A144159HIGIDVNSIKSIKTVKEEEEEESSSS-SEEEEbbbbbbvbaxpabbbp
1qqg_A_1911qqg   A192207ISFVKLNSEAAAVVLQEEEEETT-SS-SEEEEbbbbxpvxabxabbxx
1ukg_A_1461ukg   A146161HIGIDVNSIRSVKTVKEEEEEESSSS-SEEEEbbbbbbvbaxpabbbx
1wbf_A_1361wbf   A136151HIGIDVNSVISTKTVPEEEEEESSSS-SEEEEbxbxbbvbabpabbbx
2ltn_A_1362ltn   A136151HIGIDVNSIKSVNTKSEEEEEESSSS-SEEEEbbbbbbvbaxpabbbp
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fny_A_1401fny   A     CACALCIUM ION H - 140
1fny_A_1401fny   A     CACALCIUM ION I - 148
1fx5_A_1431fx5   A     MNMANGANESE (II) ION H - 143
1fx5_A_1431fx5   A     CACALCIUM ION H - 143
1fx5_A_1431fx5   A     MNMANGANESE (II) ION D - 147
1fx5_A_1431fx5   A     MNMANGANESE (II) ION V - 151
1fx5_A_1431fx5   A     MNMANGANESE (II) ION S - 153
1g7y_A_1381g7y   A     CACALCIUM ION H - 138
1g7y_A_1381g7y   A     MNMANGANESE (II) ION H - 138
1g7y_A_1381g7y   A     MNMANGANESE (II) ION D - 142
1g7y_A_1381g7y   A     MNMANGANESE (II) ION I - 146
1g7y_A_1381g7y   A     MNMANGANESE (II) ION S - 148
1g7y_A_1381g7y   A     MNMANGANESE (II) ION T - 151
1gzc_A_1421gzc   A     MNMANGANESE (II) ION H - 142
1gzc_A_1421gzc   A     CACALCIUM ION H - 142
1gzc_A_1421gzc   A     MNMANGANESE (II) ION G - 144
1gzc_A_1421gzc   A     MNMANGANESE (II) ION D - 146
1gzc_A_1421gzc   A     MNMANGANESE (II) ION I - 150
1gzc_A_1421gzc   A     MNMANGANESE (II) ION S - 152
1gzc_A_1421gzc   A     MNMANGANESE (II) ION T - 155
1h9w_A_241h9w   A     MNMANGANESE (II) ION H - 24
1h9w_A_241h9w   A     CACALCIUM ION H - 24
1h9w_A_241h9w   A     MNMANGANESE (II) ION D - 28
1h9w_A_241h9w   A     MNMANGANESE (II) ION I - 32
1h9w_A_241h9w   A     MNMANGANESE (II) ION S - 34
1h9w_A_241h9w   A     MNMANGANESE (II) ION T - 37
1led_*_1451led   *     MNMANGANESE (II) ION H - 145
1led_*_1451led   *     CACALCIUM ION H - 145
1led_*_1451led   *     MNMANGANESE (II) ION D - 149
1led_*_1451led   *     MNMANGANESE (II) ION I - 153
1led_*_1451led   *     MNMANGANESE (II) ION S - 155
1led_*_1451led   *     MNMANGANESE (II) ION T - 158
1loe_A_1361loe   A     CACALCIUM ION H - 136
1loe_A_1361loe   A     MNMANGANESE (II) ION H - 136
1loe_A_1361loe   A     MNMANGANESE (II) ION D - 140
1loe_A_1361loe   A     MNMANGANESE (II) ION I - 144
1loe_A_1361loe   A     MNMANGANESE (II) ION S - 146
1loe_A_1361loe   A     MNMANGANESE (II) ION T - 149
1mvq_A_241mvq   A     MNMANGANESE (II) ION N - 28
1nls_*_241nls   *     MNMANGANESE (II) ION V - 32
1qnw_A_1441qnw   A     MNMANGANESE (II) ION H - 144
1qnw_A_1441qnw   A     CACALCIUM ION H - 144
1qnw_A_1441qnw   A     MNMANGANESE (II) ION D - 148
1qnw_A_1441qnw   A     MNMANGANESE (II) ION I - 152
1qnw_A_1441qnw   A     MNMANGANESE (II) ION S - 154
1qnw_A_1441qnw   A     MNMANGANESE (II) ION T - 157
1ukg_A_1461ukg   A     MNMANGANESE (II) ION H - 146
1ukg_A_1461ukg   A     CACALCIUM ION H - 146
1ukg_A_1461ukg   A     MNMANGANESE (II) ION D - 150
1ukg_A_1461ukg   A     MNMANGANESE (II) ION I - 154
1ukg_A_1461ukg   A     MNMANGANESE (II) ION S - 156
1ukg_A_1461ukg   A     MNMANGANESE (II) ION T - 159
1wbf_A_1361wbf   A     MNMANGANESE (II) ION V - 144
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gzc_A_1421gzc   A MNAMN BINDING SITE FOR CHAIN AH - 142

Clusters included in this Subclass
CLUSTER: HA.6.27