Information on SUBCLASS 6.17.1 |
Subclass Accession number: 6452
Subclass: 6.17.1 ![]() Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 6 Average sequence ID (%) : 19.4 +/- 26.8 Average RMSD (Å) : 1.083 +/- 0.343 Consensus geometry
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Consensus Sequence: | XXXXcpPXXh |
(φψ)-conformation: | bbapebwpbb |
Pattern: | [aly] | [CGIV] | x | x | x | [kqsw] | [DGS] | [AKQST] | [AP] | [rstw] | x | [FGLVW] |
Conservation: | -0.371 | -0.428 | -0.046 | -0.958 | -0.324 | -0.472 | 1.195 | 0.144 | 2.698 | -0.378 | -0.510 | -0.550 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a7q_L_84 | 1a7q | L | 87 | 98 | YCQHFWSTPRSF | EEEE-SSSS-EE | bbbbaxebwxbb |
1ir3_A_1062 | 1ir3 | A | 1063 | 1074 | LGVVSKGQPTLV | EEEE-SSSS-EE | aebbaxebwxbb |
1luf_A_640 | 1luf | A | 641 | 652 | LGVCAVGKPMCL | EEEE-SSSS-EE | abbbaxebwxbb |
1p4o_A_1035 | 1p4o | A | 1036 | 1047 | LGVVSQGQPTLV | EEEE-SSSS-EE | aebbabebwxbb |
1pne_*_16 | 1pne | - | 20 | 31 | AIVGYKDSPSVW | EEEE-SSS-EEE | bbbxaxebxbxa |
1vie_*_29 | 1vie | - | 29 | 40 | RVRKKSGAAWQG | EEEESSSS--EE | xbbxabepxbbe |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ir3_A_1062 | 1ir3 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | M - 1076 |
1ir3_A_1062 | 1ir3 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | E - 1077 |
Clusters included in this Subclass |
CLUSTER: HA.6.73 |