Information on SUBCLASS 6.18.1 |
Subclass Accession number: 6453
Subclass: 6.18.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 28.0 +/- 29.7 Average RMSD (Å) : 0.633 +/- 0.052 Consensus geometry
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Consensus Sequence: | hpGXXcphph |
(φψ)-conformation: | bbepaaapbb |
Pattern: | [IVW] | [DEST] | [GS] | [DGP] | x | [KNR] | [DNQR] | [AG] | [kst] | [AGV] |
Conservation: | -0.088 | -0.158 | 2.103 | -0.170 | -1.466 | 0.645 | -0.120 | 0.786 | -1.033 | -0.499 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f8e_A_189 | 1f8e | A | 194 | 203 | ISGPNNNASA | EES-TTS-EE | bbexaaaxbb |
1inv_*_188 | 1inv | - | 193 | 202 | VDGPDNDALV | EES-GGG-EE | bbexaaaxbx |
1nye_D_627 | 1nye | D | 631 | 640 | WEGDIKRGKG | EES-TTT-EE | bbepaaaxbb |
1qwi_A_7 | 1qwi | A | 11 | 20 | WESDIKRGKG | EES-SSS-EE | bbexaaaxbb |
1ukk_A_10 | 1ukk | A | 10 | 19 | WEGGLRQGKG | EES-TTT-EE | bbexaaaxbb |
2bat_*_189 | 2bat | - | 194 | 203 | ITGDDKNATA | EES-GGG-EE | bbexaaaxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qwi_A_7 | 1qwi | A | MSESELENOMETHIONINE | W - 11 |
1qwi_A_7 | 1qwi | A | MSESELENOMETHIONINE | I - 15 |
1ukk_A_10 | 1ukk | A | MSESELENOMETHIONINE | W - 10 |
1ukk_A_10 | 1ukk | A | MSESELENOMETHIONINE | L - 14 |
1ukk_A_10 | 1ukk | A | MSESELENOMETHIONINE | G - 19 |
2bat_*_189 | 2bat | * | NAGN-ACETYL-D-GLUCOSAMINE | D - 197 |
2bat_*_189 | 2bat | * | NAGN-ACETYL-D-GLUCOSAMINE | K - 199 |
2bat_*_189 | 2bat | * | NAGN-ACETYL-D-GLUCOSAMINE | N - 200 |
Clusters included in this Subclass |
CLUSTER: HA.6.70 |