Information on SUBCLASS 6.21.1 |
Subclass Accession number: 6456
Subclass: 6.21.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 39.2 +/- 27.3 Average RMSD (Å) : 0.480 +/- 0.349 Consensus geometry
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Consensus Sequence: | XhXpXXhGph |
(φψ)-conformation: | bbpbabpgbb |
Pattern: | x | [iv] | [ELM] | [DS] | [GPQ] | [FLMT] | [kp] | [G] | [DE] | [FIM] | [HR] | [ILMY] |
Conservation: | -0.854 | -0.577 | -0.899 | 0.190 | -0.547 | -0.735 | -0.264 | 2.534 | 1.074 | -0.109 | 0.633 | -0.445 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aru_*_232 | 1aru | - | 232 | 243 | EELSPFPGEFRM | EE-BSSTT--EE | xbxbabpgxbbx |
1b80_A_224 | 1b80 | A | 224 | 235 | EVESPLPGEIRI | EE-BSSTT--EE | bbxbabpvbbbb |
1llp_*_224 | 1llp | - | 224 | 235 | EVESGMAGEIRI | EE-BSSTT--EE | bbxbabpvbxbb |
1qpa_A_224 | 1qpa | A | 224 | 235 | TVMSPLKGEMRL | EE-BSSBT--EE | bbxbabxvbbbx |
1r13_A_165 | 1r13 | A | 169 | 180 | MIEDQTPGDFHY | EEE-SSTT-EEE | bbxxaxpgxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aru_*_232 | 1aru | * | HEMPROTOPORPHYRIN IX CONTAINING FE | M - 243 |
1aru_*_232 | 1aru | * | CACALCIUM ION | M - 243 |
1b80_A_224 | 1b80 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | I - 235 |
1llp_*_224 | 1llp | * | MANALPHA-D-MANNOSE | A - 230 |
1llp_*_224 | 1llp | * | MANALPHA-D-MANNOSE | G - 231 |
1llp_*_224 | 1llp | * | MANALPHA-D-MANNOSE | E - 232 |
1qpa_A_224 | 1qpa | A | MANALPHA-D-MANNOSE | P - 228 |
1qpa_A_224 | 1qpa | A | MANALPHA-D-MANNOSE | L - 229 |
1qpa_A_224 | 1qpa | A | MANALPHA-D-MANNOSE | K - 230 |
1qpa_A_224 | 1qpa | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 235 |
1qpa_A_224 | 1qpa | A | CACALCIUM ION | L - 235 |
Clusters included in this Subclass |
CLUSTER: HA.7.72 |
CLUSTER: HA.8.42 |