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Information on SUBCLASS 6.25.1
Subclass Accession number: 6460
Subclass: 6.25.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 20.0 +/- 19.0
Average RMSD (Å) : 0.800 +/- 0.235

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XhXXSpPhXh
(φψ)-conformation: bbpapbwpbb
Pattern: x[CFV][AIKMT]x[ES][HNRY][P]xx[ACI]x[cmv]
Conservation:-0.6870.050-0.491-0.7440.6970.1772.822-0.744-0.6280.162-0.518-0.096
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c2a_A_721c2a   A7384ICTRSNPPTCRCEE-SSSS-EEEEbbxaxbwxbbbb
1d6r_I_391d6r   I4051ICALSYPAQCFCEE-SSSS-EEEEbbxaxbwpbbbx
1jeh_A_3611jeh   A361372SVMYSHPEVAWVEEE-SSSEEEEEbbxaxbwxbbbb
1mp8_A_4861mp8   A488499GVITENPVWIIMEEE-SSS-EEEEebbabpwxbbbb
1nr0_A_1501nr0   A154165DFKPSRPFRIISEE-SSSS-EEEEbxxabxwxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jeh_A_3611jeh   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 362
1jeh_A_3611jeh   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 364
1mp8_A_4861mp8   A     ADPADENOSINE-5'-DIPHOSPHATE M - 499
1mp8_A_4861mp8   A     ADPADENOSINE-5'-DIPHOSPHATE E - 500
1nr0_A_1501nr0   A     MNMANGANESE (II) ION V - 153
1nr0_A_1501nr0   A     MNMANGANESE (II) ION D - 154
1nr0_A_1501nr0   A     MNMANGANESE (II) ION F - 155

Clusters included in this Subclass
CLUSTER: HA.5.100