Information on SUBCLASS 6.25.1 |
Subclass Accession number: 6460
Subclass: 6.25.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 20.0 +/- 19.0 Average RMSD (Å) : 0.800 +/- 0.235 Consensus geometry
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Consensus Sequence: | XhXXSpPhXh |
(φψ)-conformation: | bbpapbwpbb |
Pattern: | x | [CFV] | [AIKMT] | x | [ES] | [HNRY] | [P] | x | x | [ACI] | x | [cmv] |
Conservation: | -0.687 | 0.050 | -0.491 | -0.744 | 0.697 | 0.177 | 2.822 | -0.744 | -0.628 | 0.162 | -0.518 | -0.096 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c2a_A_72 | 1c2a | A | 73 | 84 | ICTRSNPPTCRC | EE-SSSS-EEEE | bbxaxbwxbbbb |
1d6r_I_39 | 1d6r | I | 40 | 51 | ICALSYPAQCFC | EE-SSSS-EEEE | bbxaxbwpbbbx |
1jeh_A_361 | 1jeh | A | 361 | 372 | SVMYSHPEVAWV | EEE-SSSEEEEE | bbxaxbwxbbbb |
1mp8_A_486 | 1mp8 | A | 488 | 499 | GVITENPVWIIM | EEE-SSS-EEEE | ebbabpwxbbbb |
1nr0_A_150 | 1nr0 | A | 154 | 165 | DFKPSRPFRIIS | EE-SSSS-EEEE | bxxabxwxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jeh_A_361 | 1jeh | A | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 362 |
1jeh_A_361 | 1jeh | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Y - 364 |
1mp8_A_486 | 1mp8 | A | ADPADENOSINE-5'-DIPHOSPHATE | M - 499 |
1mp8_A_486 | 1mp8 | A | ADPADENOSINE-5'-DIPHOSPHATE | E - 500 |
1nr0_A_150 | 1nr0 | A | MNMANGANESE (II) ION | V - 153 |
1nr0_A_150 | 1nr0 | A | MNMANGANESE (II) ION | D - 154 |
1nr0_A_150 | 1nr0 | A | MNMANGANESE (II) ION | F - 155 |
Clusters included in this Subclass |
CLUSTER: HA.5.100 |