Information on SUBCLASS 6.26.1 |
Subclass Accession number: 6461
Subclass: 6.26.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 21.2 +/- 22.8 Average RMSD (Å) : 0.700 +/- 0.424 Consensus geometry
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Consensus Sequence: | hphhppphXX |
(φψ)-conformation: | bppeapapbb |
Pattern: | x | x | [EKNR] | [GL] | [AG] | [DKS] | [ST] | [DEGS] | [LW] | x | x |
Conservation: | -1.000 | -1.250 | 0.165 | -0.757 | 1.790 | -0.055 | 1.331 | -0.349 | 0.597 | -1.121 | -0.350 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ejx_C_1020 | 1ejx | C | 1020 | 1030 | KVRLADTELWI | EEE-TTSS-EE | bbxxeaxaxbb |
1exb_A_39 | 1exb | A | 39 | 49 | YRNLGKSGLRV | EEESTTSS-EE | bbxxeaxaxxb |
1pyf_A_4 | 1pyf | A | 4 | 13 | .AKLGKSDLQV | .EE-TTS--EE | .bxxeaxaxbb |
4bcl_*_10 | 4bcl | - | 18 | 28 | ILEGGSSSWGQ | EE--TT---EE | bxxbeaxaxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1pyf_A_4 | 1pyf | A | EGLETHYLENE GLYCOL | K - 5 |
1pyf_A_4 | 1pyf | A | MSESELENOMETHIONINE | L - 6 |
1pyf_A_4 | 1pyf | A | EGLETHYLENE GLYCOL | L - 6 |
1pyf_A_4 | 1pyf | A | EGLETHYLENE GLYCOL | G - 7 |
1pyf_A_4 | 1pyf | A | EGLETHYLENE GLYCOL | K - 8 |
1pyf_A_4 | 1pyf | A | MSESELENOMETHIONINE | V - 13 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | A - 11 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | H - 12 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | S - 13 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | Y - 15 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | E - 16 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | I - 17 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | V - 29 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | K - 30 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | G - 31 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | R - 32 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | A - 33 |
4bcl_*_10 | 4bcl | * | BCLBACTERIOCHLOROPHYLL A | V - 35 |
Clusters included in this Subclass |
CLUSTER: HA.5.245 |
CLUSTER: HA.6.167 |