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Information on SUBCLASS 7.3.1
Subclass Accession number: 6484
Subclass: 7.3.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 15

Average sequence ID (%) : 10.3 +/- 16.4
Average RMSD (Å) : 1.100 +/- 0.248

Consensus geometry
d (Å): 7 delta (°): 135-180 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXXXXphXXhX
(φψ)-conformation: bbabaapppbb
Pattern: [cfiklmtv][agilwy]xxxx[kpqst][aeknqrs]xxxxx
Conservation:0.4931.025-1.2820.545-1.0570.4141.6911.161-0.7250.017-0.389-0.314-1.578
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1es6_A_2031es6   A205217PGISFHPKLRPILEEEE--TTS--EEwbbbabaabxxbx
1f39_A_2001f39   A202214FLQPLNPQYPMIPEEE-SSTTS--EEbbbxaxaaxxxbp
1gen_*_4921gen   -493505IWRTVTPRDKPMGEEEESSTTS--EEbbbbabaabxxxe
1h4r_A_2701h4r   A272284TIKPLDKKIDVFKEEEESSTTS--EEbbbxaxaaxxxbb
1iiu_A_851iiu   A89101KYWGVASFLQKGNEEEESSSSS--EEbbbbaxaaxpbeb
1j19_A_2541j19   A256268VIKPIDKKAPDFVEEEESSTTS--EEbbxxaxaaxxxxb
1kgc_E_881kgc   E92104CASSLGQAYEQYFEEEESSTTS--EEbbbbabaabxxbx
1kt7_A_851kt7   A89101KYWGVASFLQKGNEEEESSTTS--EExbbbaxaaxpbbb
1n13_B_881n13   B95107VAIPKDKSLCGLIEEEESSTTS-BEEbxbxaxaaxxxbb
1nd6_A_2921nd6   A297309MYYRNETQHEPYPEEEE--TTS--EEbbbxabaabxpxx
1nu6_A_1711nu6   A172184IYVKIEPNLPSYREEEESSTTS--EExbbbabaaxpxxx
1orv_A_1711orv   A172184IYVKNEPNLSSQREEEESSTTS--EExbbbabaaxxxbx
1qfm_A_991qfm   A100112LYVQDSLEGEARVEEEESSSSS--EExbbbabaaxxxbx
1uwv_A_2301uwv   A230242LYLAPDSEILETVEEEESSSS--EEEbbbbabaaxbxxa
2por_*_2752por   -281293IADNDLPNSDMVAEEEE-SSS---EEbbbbaxaapxxxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1iiu_A_851iiu   A     RTLRETINOL M - 88
1iiu_A_851iiu   A     RTLRETINOL K - 89
1iiu_A_851iiu   A     RTLRETINOL Y - 90
1iiu_A_851iiu   A     RTLRETINOL W - 91
1iiu_A_851iiu   A     RTLRETINOL F - 96
1iiu_A_851iiu   A     RTLRETINOL L - 97
1iiu_A_851iiu   A     RTLRETINOL Q - 98
1iiu_A_851iiu   A     RTLRETINOL D - 102
1iiu_A_851iiu   A     RTLRETINOL H - 104
1n13_B_881n13   B     PVLPYRUVOYL GROUP G - 105
1n13_B_881n13   B     PVLPYRUVOYL GROUP L - 106
1n13_B_881n13   B     AG2AGMATINE L - 106
1n13_B_881n13   B     PVLPYRUVOYL GROUP I - 107
1n13_B_881n13   B     AG2AGMATINE I - 107
1n13_B_881n13   B     PVLPYRUVOYL GROUP M - 108
1n13_B_881n13   B     AG2AGMATINE M - 108
1n13_B_881n13   B     PVLPYRUVOYL GROUP E - 109
1n13_B_881n13   B     AG2AGMATINE E - 109
1n13_B_881n13   B     MPD2-METHYL-2,4-PENTANEDIOL E - 109
1nd6_A_2921nd6   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 299
1nd6_A_2921nd6   A     NAGN-ACETYL-D-GLUCOSAMINE R - 300
1nd6_A_2921nd6   A     NAGN-ACETYL-D-GLUCOSAMINE N - 301
1nd6_A_2921nd6   A     NAGN-ACETYL-D-GLUCOSAMINE E - 302
1nd6_A_2921nd6   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 308
1uwv_A_2301uwv   A     MSESELENOMETHIONINE L - 230
1uwv_A_2301uwv   A     MSESELENOMETHIONINE Y - 231
1uwv_A_2301uwv   A     MSESELENOMETHIONINE L - 232
1uwv_A_2301uwv   A     PO4PHOSPHATE ION A - 233
1uwv_A_2301uwv   A     PO4PHOSPHATE ION D - 235
1uwv_A_2301uwv   A     PO4PHOSPHATE ION S - 236
1uwv_A_2301uwv   A     PO4PHOSPHATE ION E - 237
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL I - 277
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL G - 279
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL G - 280
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL I - 281
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL N - 284
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL L - 286
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL P - 287
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL N - 288
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL S - 289
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL A - 293
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL D - 294
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL L - 295
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL G - 296
2por_*_2752por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL V - 297
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1uwv_A_2301uwv   A AC5PO4 BINDING SITE FOR CHAIN AS - 236

Clusters included in this Subclass
CLUSTER: HA.6.50
CLUSTER: HA.6.97
CLUSTER: HA.7.17
CLUSTER: HA.8.11