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Information on SUBCLASS 7.7.1
Subclass Accession number: 6488
Subclass: 7.7.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 9.1 +/- 11.2
Average RMSD (Å) : 1.038 +/- 0.213

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hXppXXXXXXX
(φψ)-conformation: bbabapaapbb
Pattern: x[acfilvw]x[enpt][DEGST]xx[degp]x[ades]x[fiklv]x
Conservation:-1.152-0.757-0.1251.4561.462-1.004-0.1200.320-1.1271.218-1.1920.5660.455
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a06_*_1471a06   -147159LLYYSLDEDSKIMEEESSSSTT--EExbxabaxaapxxb
1aog_A_1351aog   A137149NVRESADPASAVKEEESSSSTTS-EExbbabaxaaxxxa
1dxr_H_901dxr   H90102LAQTDGFEGAPLQEEESSSSTT--EEbbxabapaaxxxb
1g86_A_351g86   A3951DFHTEMKEESDIVEEESSSSTTS-EEbxxabaxaaxxba
1j8m_F_2691j8m   F271283FIGTGEKIDELEVEEE-SSSTT-EEEbbxabaxaaxbbx
1kxi_A_21kxi   A214KCHNTQLPFIYKTEEE-SSSSS-EEExbxababaapbbx
1rjb_A_5761rjb   A579591VQVTGSSDNEYFYEEE-SSSTT-EEEbbxabaxaaxbbx
2tod_A_3512tod   A355367VWGPTCDGLDQIVEE-SSS-TT-EEEbbxaxaxaaxbab
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g86_A_351g86   A     NEQN-ETHYLMALEIMIDE Q - 37
1g86_A_351g86   A     NEQN-ETHYLMALEIMIDE H - 53
1g86_A_351g86   A     NEQN-ETHYLMALEIMIDE Q - 55
2tod_A_3512tod   A     DMOALPHA-DIFLUOROMETHYLORNITHINE T - 359
2tod_A_3512tod   A     PLPPYRIDOXAL-5'-PHOSPHATE C - 360
2tod_A_3512tod   A     DMOALPHA-DIFLUOROMETHYLORNITHINE C - 360
2tod_A_3512tod   A     PLPPYRIDOXAL-5'-PHOSPHATE D - 361
2tod_A_3512tod   A     DMOALPHA-DIFLUOROMETHYLORNITHINE D - 361
2tod_A_3512tod   A     DMOALPHA-DIFLUOROMETHYLORNITHINE G - 362
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
2tod_A_3512tod   A CAACATALYTIC SITEC - 360
2tod_A_3512tod   A CAACATALYTIC SITED - 361

Clusters included in this Subclass
CLUSTER: HA.8.21
CLUSTER: HA.9.42