Information on SUBCLASS 7.11.1 |
Subclass Accession number: 6493
Subclass: 7.11.1 ![]() Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 5 Average sequence ID (%) : 64.8 +/- 17.0 Average RMSD (Å) : 0.260 +/- 0.055 Consensus geometry
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Consensus Sequence: | YGppchXPPXh |
(φψ)-conformation: | bbpaalpwwbb |
Pattern: | [V] | [A] | [HQ] | [G] | [I] | [V] | [S] | [Y] | [G] | [HKR] | [NPS] | [DNS] | [AG] | [KMTV] | [PT] | [P] | [ADER] | [AIV] | [CFY] | [T] | [KR] |
Conservation: | 0.224 | 0.224 | -0.241 | 1.311 | 0.224 | 0.224 | 0.224 | 1.855 | 1.311 | -0.685 | -1.128 | -0.687 | -0.458 | -1.594 | -0.282 | 1.855 | -1.576 | -0.878 | -0.695 | 0.767 | 0.006 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cgh_A_204 | 1cgh | A | 204 | 224 | VAHGIVSYGKSSGVPPEVFTR | EEEEEEEE--TT--S-EEEEE | bxabbxabbxaavxwwbbbxx |
1euf_A_208 | 1euf | A | 208 | 228 | VAQGIVSYGRNDGTTPDVYTR | EEEEEEEE--TT--S-EEEEE | bxabbpabbxaavxxwbbbxx |
1iau_A_204 | 1iau | A | 204 | 224 | VAQGIVSYGRNNGMPPRACTK | EEEEEEEE--TTS-S-EEEEE | bxabbpabbxaavxwwbbbxx |
1nn6_A_206 | 1nn6 | A | 206 | 226 | VAQGIVSYGRSDAKPPAVFTR | EEEEEEEE--TT--S-EEEEE | bxabbxabbxaavxwwbbbxx |
3rp2_A_206 | 3rp2 | A | 206 | 226 | VAHGIVSYGHPDAKPPAIFTR | EEEEEEEE--TT--S-EEEEE | bxabbpabbxaalxwwbbbxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cgh_A_204 | 1cgh | A | PPHPHENYLALANINE PHOSPHINIC ACID | S - 214 |
1cgh_A_204 | 1cgh | A | SINSUCCINIC ACID | G - 216 |
1cgh_A_204 | 1cgh | A | PPHPHENYLALANINE PHOSPHINIC ACID | G - 216 |
1iau_A_204 | 1iau | A | ASAASPARTIC ALDEHYDE | G - 216 |
Clusters included in this Subclass |
CLUSTER: HA.8.31 |