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Information on SUBCLASS 7.12.1
Subclass Accession number: 6494
Subclass: 7.12.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 11.2 +/- 12.3
Average RMSD (Å) : 1.340 +/- 0.270

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: hXXpppXpXhX
(φψ)-conformation: bbabapaaapb
Pattern: x[glvy][cfw][AFV][gs]x[GRST][DEKS][EKS]x[EKMQ][dgs][ALM]x[flpt]x
Conservation:-0.355-1.626-0.0590.9200.045-0.7730.2281.1721.533-0.6241.153-0.1881.045-1.014-1.459-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1iwe_A_4411iwe   A441455VKWVGVGKSRESMIQ.EEEEE-SSSTTTEEE.xabbxabaxaaaxbx.
1lbv_A_981lbv   A100115SLCFSYSDKLKDAFFGEEEEESSSBGGGEEEEbbbxbabaxaaapabb
1o7f_A_881o7f   A89104DVKVSETSSHQDAVTIEEEE-SSS-GGG-EEEbbbbbababaaaxbxa
1qtm_A_3061qtm   A307322VGFVLSRKEPMWADLLEEEEESSS-TTT--EExbbbbabaxaaaxbxa
1rj9_B_2671rj9   B267281IYFAGVSEKPEGLEP.EEEEE-SSSTT-EEE.xabbxabaxaaabbx.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1rj9_B_2671rj9   B     GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER A - 270
1rj9_B_2671rj9   B     GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER G - 271
1rj9_B_2671rj9   B     GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER V - 272
1rj9_B_2671rj9   B     GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER S - 273
1rj9_B_2671rj9   B     GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER E - 274
1rj9_B_2671rj9   B     GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER G - 278

Clusters included in this Subclass
CLUSTER: HA.8.30