Information on SUBCLASS 7.14.1 |
Subclass Accession number: 6496
Subclass: 7.14.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 30.4 +/- 32.6 Average RMSD (Å) : 0.375 +/- 0.222 Consensus geometry
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Consensus Sequence: | hXhcppXhXhh |
(φψ)-conformation: | ebpgpabpabb |
Pattern: | [lmt] | [CITV] | [KS] | [AFL] | [GV] | [FKY] | [AL] | [GN] | [DNS] | [DET] | [AE] | [AP] | [AQR] | [AFV] | [IV] | [FIL] | [PQ] |
Conservation: | -1.345 | -0.835 | 0.710 | -1.299 | -0.412 | -0.433 | -0.306 | 1.489 | 0.314 | -0.165 | -0.072 | 1.139 | -0.703 | -1.270 | 1.855 | 0.045 | 1.287 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d4x_A_16 | 1d4x | A | 16 | 32 | MCKAGFAGDDAPRAVFP | EEEEEETTSSS-SEEEE | bxbbebpgxabxabbbp |
1k8k_A_16 | 1k8k | A | 16 | 32 | YTKLGYAGNTEPQFIIP | EEEEEETT-SS-SEEEE | bbbbebpgxabxabbbp |
1qqg_A_191 | 1qqg | A | 191 | 207 | TISFVKLNSEAAAVVLQ | EEEEEETT-SS-SEEEE | bbbbbxpvxabxabbxx |
1qz5_A_16 | 1qz5 | A | 16 | 32 | LVKAGFAGDDAPRAVFP | EEEEEETT-SS-SEEEE | bxbbebpgxabxabbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d4x_A_16 | 1d4x | A | MGMAGNESIUM ION | M - 16 |
1d4x_A_16 | 1d4x | A | ATPADENOSINE-5'-TRIPHOSPHATE | M - 16 |
1d4x_A_16 | 1d4x | A | ATPADENOSINE-5'-TRIPHOSPHATE | C - 17 |
1d4x_A_16 | 1d4x | A | MGMAGNESIUM ION | K - 18 |
1d4x_A_16 | 1d4x | A | ATPADENOSINE-5'-TRIPHOSPHATE | K - 18 |
1qz5_A_16 | 1qz5 | A | ATPADENOSINE-5'-TRIPHOSPHATE | L - 16 |
1qz5_A_16 | 1qz5 | A | ATPADENOSINE-5'-TRIPHOSPHATE | V - 17 |
1qz5_A_16 | 1qz5 | A | CACALCIUM ION | K - 18 |
1qz5_A_16 | 1qz5 | A | KABKABIRAMIDE C | A - 22 |
1qz5_A_16 | 1qz5 | A | KABKABIRAMIDE C | G - 23 |
1qz5_A_16 | 1qz5 | A | KABKABIRAMIDE C | D - 24 |
1qz5_A_16 | 1qz5 | A | KABKABIRAMIDE C | D - 25 |
1qz5_A_16 | 1qz5 | A | KABKABIRAMIDE C | A - 26 |
Clusters included in this Subclass |
CLUSTER: HA.8.58 |