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Information on SUBCLASS 8.2.1
Subclass Accession number: 6517
Subclass: 8.2.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 60.1 +/- 26.1
Average RMSD (Å) : 0.455 +/- 0.093

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XIppKXccYXTp
(φψ)-conformation: bbppaaaglpbb
Pattern: [e][w][ilv][ag][efqr][i][gkr]x[kr][apst][dkny][gn][gy][aet][t][dehy][y]
Conservation:0.6702.901-0.186-0.217-1.0050.298-0.534-0.9350.195-0.769-0.847-0.064-0.207-0.6960.670-0.6871.414
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1axt_H_441axt   H4662EWVAEIRLKSDNYATHYEEEEEE--GGGTS-EEEbxabbbxbaaavlxbbb
1ce1_H_461ce1   H4662EWIGFIRDKAKGYTTEYEEEEEE--GGGTT-EEEbxaebbxbaaavlxbbb
1clo_H_461clo   H4662EWLGFIGNKANGYTTEYEEEEEE--TTTTT-EEEbxaebbxxaaavlxbbb
1flr_H_451flr   H4662EWVAQIRNKPYNYETYYEEEEEE--GGGTT-EEEbxabbbxbaaallpbbb
1kel_H_461kel   H4662EWLGFIRNKAKGYTTEYEEEEEE--TTTTT-EEEbxaebbxxaaavlxbbb
1nbv_H_461nbv   H4662EWVARIRSKSNNYATYYEEEEEE--GGGTT-EEEbxabbbxxaaavlpbbb
1pz5_B_441pz5   B4662EWVAEIRLKSNNYATHYEEEEEE--GGGTT-EEEbxabbbxxaaavlpbbb
1q1j_H_461q1j   H4662EWVGRIKSRTDGGTTDYEEEEEE--GGGT--EEEbxaebbxxaaagUxbbb
1q9r_B_461q9r   B4662EWLGFIRNKANGYTTEYEEEEEE--GGGTT-EEEbxaebbxxaaavlxbbb
1q9w_B_461q9w   B4662EWLGFIRNKPKGYTTEYEEEEEE--TTTTT-EEEbxaebbxxaaavlxbbb
1sm3_H_441sm3   H4662EWVAEIRLKSNNYATHYEEEEEE--GGGTS-EEEbxabbbxxaaavlxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1flr_H_451flr   H     FLU2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID R - 52
1flr_H_451flr   H     FLU2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID N - 53
1flr_H_451flr   H     FLU2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID Y - 56
1kel_H_461kel   H     AAH1-[N-4'-NITROBENZYL-N-4'-CARBOXYBUTYLAMINO] METHYLPHOSPHONIC ACID W - 47
1kel_H_461kel   H     AAH1-[N-4'-NITROBENZYL-N-4'-CARBOXYBUTYLAMINO] METHYLPHOSPHONIC ACID F - 50
1kel_H_461kel   H     AAH1-[N-4'-NITROBENZYL-N-4'-CARBOXYBUTYLAMINO] METHYLPHOSPHONIC ACID I - 51
1kel_H_461kel   H     AAH1-[N-4'-NITROBENZYL-N-4'-CARBOXYBUTYLAMINO] METHYLPHOSPHONIC ACID R - 52
1kel_H_461kel   H     AAH1-[N-4'-NITROBENZYL-N-4'-CARBOXYBUTYLAMINO] METHYLPHOSPHONIC ACID N - 53
1kel_H_461kel   H     AAH1-[N-4'-NITROBENZYL-N-4'-CARBOXYBUTYLAMINO] METHYLPHOSPHONIC ACID A - 55
1kel_H_461kel   H     AAH1-[N-4'-NITROBENZYL-N-4'-CARBOXYBUTYLAMINO] METHYLPHOSPHONIC ACID K - 56
1kel_H_461kel   H     AAH1-[N-4'-NITROBENZYL-N-4'-CARBOXYBUTYLAMINO] METHYLPHOSPHONIC ACID T - 59
1kel_H_461kel   H     AAH1-[N-4'-NITROBENZYL-N-4'-CARBOXYBUTYLAMINO] METHYLPHOSPHONIC ACID E - 61
1q9r_B_461q9r   B     MGMAGNESIUM ION E - 46
1q9r_B_461q9r   B     MGMAGNESIUM ION W - 47
1q9r_B_461q9r   B     KDO3-DEOXY-D-MANNO-OCT-2-ULOSONIC ACID F - 50
1q9r_B_461q9r   B     KDA(3-DEOXY-D-MANNO-OCT-2-ULOSONIC ACID)-2-O-ALLYL R - 52
1q9r_B_461q9r   B     KDO3-DEOXY-D-MANNO-OCT-2-ULOSONIC ACID R - 52
1q9r_B_461q9r   B     ZNZINC ION R - 52
1q9w_B_461q9w   B     MGMAGNESIUM ION R - 52
1sm3_H_441sm3   H     CDCADMIUM ION R - 52

Clusters included in this Subclass
CLUSTER: HA.7.20