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Information on SUBCLASS 9.6.1
Subclass Accession number: 6551
Subclass: 9.6.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 20.6 +/- 22.5
Average RMSD (Å) : 0.713 +/- 0.285

Consensus geometry
d (Å): 13 delta (°): 135-180 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: hXpXXhXXppXhp
(φψ)-conformation: bbpaagpppppbb
Pattern: [GIWY][dent][ILY][gkrst][CLTV]x[HNT][ADGQRS][adqs][GTV][ANSTV][alpt][EST][denr][aiptv][lvy][dhnrty]x
Conservation:-0.6900.1031.171-0.6930.636-0.7652.051-0.393-0.5271.3460.139-1.0231.797-0.142-0.690-0.132-1.197-0.991
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ciu_*_5561ciu   -558575YNISLKTSSGATSNTYNNEEEEEE-TT--B---EEEbbxbbbxaavxxxxxbxv
1f2q_A_641f2q   A6481GEYKCQHQQVNESEPVYLEEEEEE-TTSS----EEEexbbbbbaaUbxxxxbbb
1k3i_A_6161k3i   A618635WMLFVMNSAGVPSVASTIEEEEEE-TTS-B---EEEbbxbbbxaavxxxxxbxb
1kcl_A_5591kcl   A561578YNIKVANAAGTASNVYDNEEEEEE-TT--B---EEEbxxbbbxaagxxxxbbxv
1l4i_A_1861l4i   A186203ITYKTINDYGALTEQVRGEEEEEE-TTS-B---EEEbbbbbbxaavxxxxpbbb
1pam_A_5591pam   A561578YDIRVANAAGAASNIYDNEEEEEE-TTS-B---EEEbxbbbbxaavxbxxxbxv
2fcb_A_692fcb   A6986GEYTCQTGQTSLSDPVHLEEEEEE-TTSB----EEEexbbbbbaabxpxxxbbb
2rsp_A_802rsp   A8097IELGVINRDGSLERPLLLEEEEEE-TTS-B---EEEbxbbxxxaavxbxxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f2q_A_641f2q   A     NAGN-ACETYL-D-GLUCOSAMINE G - 64
1f2q_A_641f2q   A     NAGN-ACETYL-D-GLUCOSAMINE E - 65
1f2q_A_641f2q   A     NAGN-ACETYL-D-GLUCOSAMINE L - 81
1f2q_A_641f2q   A     NAGN-ACETYL-D-GLUCOSAMINE E - 82
1f2q_A_641f2q   A     NAGN-ACETYL-D-GLUCOSAMINE V - 83
1f2q_A_641f2q   A     MANALPHA-D-MANNOSE V - 83

Clusters included in this Subclass
CLUSTER: HA.8.17