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Information on SUBCLASS 9.13.1
Subclass Accession number: 6558
Subclass: 9.13.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005543 (>75 %)  GO:0008289 (>75 %)  
SCOP : 50728 (>75 %)  50729 (>75 %)  50730 (>75 %)  
Number of loops: 4

Average sequence ID (%) : 21.3 +/- 21.9
Average RMSD (Å) : 1.175 +/- 0.750

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: hXXpphpXXXhXh
(φψ)-conformation: bbabaapabpabb
Pattern: x[ILV]x[VY][EF][EKL][DSY][DEQT][LMT][DES]x[EW][KP]xx[AIV][IKL]x
Conservation:-1.4391.150-1.3751.8450.590-0.462-0.585-0.0430.2430.465-0.6900.6871.942-0.349-1.0250.452-0.547-0.858
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eaz_A_2191eaz   A219236TIGYFKSELEKEPLRVIPEEEEESSTT-SS-SEEEEbbbbbabaaxabxabbbx
1fao_A_1921fao   A192209ELKYFKDQMSPEPIRILDEEEEESSTT-SS-SEEEEbbbbbabaaxabxabbbb
1fgy_A_2921fgy   A292309CLYYFEYTTDKEPRGIIPEEEEESSTT-SS-SEEEEbbxbbabaapabxabbbx
1lsh_B_13911lsh   B13941411IVAVELSDLSVWKLCAKFEEEEES-TT---EEEEEEbbbbxaxaaxaxbbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eaz_A_2191eaz   A     CITCITRIC ACID Y - 222
1eaz_A_2191eaz   A     CITCITRIC ACID F - 223
1eaz_A_2191eaz   A     CITCITRIC ACID K - 224
1eaz_A_2191eaz   A     CITCITRIC ACID L - 232
1eaz_A_2191eaz   A     CITCITRIC ACID R - 233
1fao_A_1921fao   A     ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE Y - 195
1fao_A_1921fao   A     ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE K - 197
1fao_A_1921fao   A     ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE I - 205
1fao_A_1921fao   A     ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE R - 206
1fgy_A_2921fgy   A     4IPINOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE Y - 295
1fgy_A_2921fgy   A     4IPINOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE R - 305
1fgy_A_2921fgy   A     4IPINOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE G - 306
1lsh_B_13911lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID I - 1394
1lsh_B_13911lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID A - 1396
1lsh_B_13911lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID W - 1405
1lsh_B_13911lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID L - 1407
1lsh_B_13911lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID A - 1409
1lsh_B_13911lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID K - 1410
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1eaz_A_2191eaz   A LBSLBS STANDS FOR LIPID BINDING SITE. CB ATOM RESPONSIBLE FOR THE NOVEL SPECIFICITY OF THIS DOMAIN. THE ALANINE AT A1024 (203) IN TAPP1, IN DAPP1 ID A GLY, WHICH CAN BIND BOTH (3,4)P2, AND (3,4,5) P3Y - 222
1eaz_A_2191eaz   A LBSLBS STANDS FOR LIPID BINDING SITE. CB ATOM RESPONSIBLE FOR THE NOVEL SPECIFICITY OF THIS DOMAIN. THE ALANINE AT A1024 (203) IN TAPP1, IN DAPP1 ID A GLY, WHICH CAN BIND BOTH (3,4)P2, AND (3,4,5) P3L - 232
1eaz_A_2191eaz   A LBSLBS STANDS FOR LIPID BINDING SITE. CB ATOM RESPONSIBLE FOR THE NOVEL SPECIFICITY OF THIS DOMAIN. THE ALANINE AT A1024 (203) IN TAPP1, IN DAPP1 ID A GLY, WHICH CAN BIND BOTH (3,4)P2, AND (3,4,5) P3R - 233

Clusters included in this Subclass
CLUSTER: HA.8.49