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Information on SUBCLASS 10.1.1
Subclass Accession number: 6567
Subclass: 10.1.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 62.1 +/- 23.7
Average RMSD (Å) : 0.345 +/- 0.144

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 90-135 rho (°): 270-315
Consensus Sequence: SWGpGCAXXcpPGV
(φψ)-conformation: abepeblpplbppb
Pattern: x[lv]x[G][IV][ITV][S][FW][G][deqrsy][GQ][C][AG]x[kpr][DGN][hknry][FPY][G][IV][Y][AT][EKR]
Conservation:-1.326-0.701-0.9381.1210.166-0.2860.3521.4111.121-1.240-0.1042.275-0.186-1.078-0.913-0.422-1.072-0.6541.1210.2031.506-0.177-0.177
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a0j_A_2041a0j   A204226QLQGVVSWGYGCAQRNKPGVYTKEEEEEEEE-SSSS-TT--EEEEEbxabbpabebeblxxvbwxbbxx
1ekb_B_2061ekb   B208230LLAGVTSFGYQCALPNRPGVYAREEEEEEEE-SSSS-TT--EEEEEbxabbpabexebvxxlbxxxbxx
1f7z_A_2041f7z   A204226ELQGIVSWGYGCALPDNPGVYTKEEEEEEEE-SSSSBTTB-EEEEEbxabbpabexebvxxvbwxbbxx
1fjs_A_2061fjs   A208230FVTGIVSWGEGCARKGKYGIYTKEEEEEEEE-SSSS-TT--EEEEEbxabbpabexebvxxvbbxbbxx
1fxy_A_2041fxy   A204226QLQGVVSWGDGCAQKNKPGVYTKEEEEEEEE-SSSSBTTB-EEEEEbxabbpabexebvxxvbwxbbxx
1gj7_B_2061gj7   B208230TLTGIVSWGRGCALKDKPGVYTREEEEEEEE-SSSSBTTB-EEEEEbxabbpabexeblbplbxxbbxx
1hj8_A_2041hj8   A204226ELQGVVSWGYGCAEPGNPGVYAKEEEEEEEE-SSSS-TT--EEEEEbxabbpabexeblxpvbwxbbxx
1hj9_A_2041hj9   A204226KLQGIVSWGSGCAQKNKPGVYTKEEEEEEEE-SSSS-TT--EEEEEbxabbpabebebvxpvbwxbbxx
1kli_H_2061kli   H208230YLTGIVSWGQGCATVGHFGVYTREEEEEEEE-STTT-TT--EEEEEbxabbpabexeblxpvbbxbbxx
1os8_A_2071os8   A208230IQVGIVSWGYGCARPGYPGVYTEEEEEEEEE-SSSS-TT--EEEEEbxabbpabexeblxpvbwxbbxx
1rtf_B_2061rtf   B208230TLVGIISWGLGCGQKDVPGVYTKEEEEEEEE-SSSS-TT--EEEEEbxabbpabebebvxpvxxxbbxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ekb_B_2061ekb   B     CH2METHYLENE GROUP T - 213
1ekb_B_2061ekb   B     CH2METHYLENE GROUP S - 214
1fjs_A_2061fjs   A     Z34N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE V - 213
1fjs_A_2061fjs   A     Z34N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE S - 214
1fjs_A_2061fjs   A     Z34N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE W - 215
1fjs_A_2061fjs   A     Z34N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE G - 216
1fjs_A_2061fjs   A     Z34N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE E - 217
1fjs_A_2061fjs   A     Z34N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE G - 218
1fjs_A_2061fjs   A     Z34N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE Y - 225
1fjs_A_2061fjs   A     Z34N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE G - 226
1fjs_A_2061fjs   A     Z34N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE I - 227
1fjs_A_2061fjs   A     Z34N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE Y - 228
1fjs_A_2061fjs   A     GOLGLYCEROL K - 230
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE V - 213
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE S - 214
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE W - 215
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE G - 216
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE R - 217
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE K - 224
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE P - 225
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE G - 226
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE V - 227
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE Y - 228
1hj8_A_2041hj8   A     BAMBENZAMIDINE G - 219
1kli_H_2061kli   H     BENBENZAMIDINE V - 213
1kli_H_2061kli   H     BENBENZAMIDINE S - 214
1kli_H_2061kli   H     BENBENZAMIDINE W - 215
1kli_H_2061kli   H     BENBENZAMIDINE G - 216
1kli_H_2061kli   H     BENBENZAMIDINE Q - 217
1kli_H_2061kli   H     BENBENZAMIDINE F - 225
1kli_H_2061kli   H     BENBENZAMIDINE G - 226
1kli_H_2061kli   H     BENBENZAMIDINE V - 227
1kli_H_2061kli   H     BENBENZAMIDINE Y - 228
1os8_A_2071os8   A     CACALCIUM ION E - 230
1rtf_B_2061rtf   B     BENBENZAMIDINE I - 213
1rtf_B_2061rtf   B     PO4PHOSPHATE ION S - 214
1rtf_B_2061rtf   B     BENBENZAMIDINE L - 217
1rtf_B_2061rtf   B     BENBENZAMIDINE Q - 221
1rtf_B_2061rtf   B     BENBENZAMIDINE V - 224
1rtf_B_2061rtf   B     BENBENZAMIDINE P - 225
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hj9_A_2041hj9   A S41SO4 BINDING SITE FOR RESIDUE A247K - 204

Clusters included in this Subclass
CLUSTER: HA.9.2