Information on SUBCLASS 10.5.1 |
Subclass Accession number: 6571
Subclass: 10.5.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 38.9 +/- 27.5 Average RMSD (Å) : 0.340 +/- 0.055 Consensus geometry
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Consensus Sequence: | DhhcpXXXNGpXhX |
(φψ)-conformation: | bppllpappgppbb |
Pattern: | [CTV] | [LV] | [D] | [AV] | x | [DGN] | [DGNS] | [DGQ] | [FITY] | x | [DN] | [G] | [NT] | x | [IV] | x | [LMV] | [DWY] |
Conservation: | -0.237 | 0.050 | 2.273 | -0.110 | -0.964 | -0.233 | -0.462 | -0.704 | -0.927 | -0.352 | 0.914 | 2.273 | 0.190 | -1.172 | 0.722 | -1.055 | -0.013 | -0.195 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1abr_B_25 | 1abr | B | 25 | 42 | CVDVYDNGYHNGNRIIMW | EEEEGGG--STT-BEEEE | bxbxpvlxaxpgxxxbxb |
1knm_A_100 | 1knm | A | 100 | 117 | CLDAVGNGTANGTLIQLY | EEEEGGG--STT-BEEEE | xpbxpvlxaxpvpxbbxb |
1m2t_B_268 | 1m2t | B | 268 | 285 | TVDVRDDDFHDGNQIQLW | EEEEGGG--STT-BEEEE | bxbxpllbappgxxxbxb |
1qxm_A_253 | 1qxm | A | 254 | 271 | VLDVYNSQIANGTHVIVD | EEEEGGG--STT-BEEEE | bxbxpllxappgpxbbbb |
1v6w_A_406 | 1v6w | A | 406 | 423 | CLDAVGGGTANGTLIQLY | EEEEGGG--STT-BEEEE | xxbxplUpaxpvxxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.9.34 |