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Information on SUBCLASS 10.9.1
Subclass Accession number: 6575
Subclass: 10.9.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0008483 (>50 %)  GO:0016769 (>50 %)  GO:0016829 (>50 %)  
SCOP : 53382 (>75 %)  53383 (>75 %)  53402 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 20.6 +/- 16.7
Average RMSD (Å) : 0.500 +/- 0.100

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXXpKhhXhPhGXX
(φψ)-conformation: bbaaFaalpppgbb
Pattern: x[ILY]xx[GST][GS][HQ][K][AFW][FGL]x[AG][P][ALP][G][CTV][GS][GLW][ILV]x[FIW]
Conservation:-0.840-0.260-0.608-0.666-0.3760.4140.9051.481-0.376-1.014-1.0140.1352.525-0.8402.003-0.3180.414-0.8400.262-0.840-0.144
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1elu_A_2161elu   A216236YYAFTGHKWFAGPAGVGGLYIEEEEESSSTT---TT-EEEEEbbxbbaaFaavxxpgbbbbbb
1h0c_A_2021h0c   A202222ILYSGSQKALNAPPGTSLISFEEEEESSSTT---TT-EEEEEbbbbxaaFaavbwxgbbbbbb
1pmm_A_2671pmm   A269289SISASGHKFGLAPLGCGWVIWEEEEETTTTT---SS-EEEEEbbbbxaaFaavxxpgbbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1elu_A_2161elu   A     PDA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID T - 220
1elu_A_2161elu   A     PDA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID H - 222
1elu_A_2161elu   A     PDA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID K - 223
1h0c_A_2021h0c   A     PLPPYRIDOXAL-5'-PHOSPHATE Y - 204
1h0c_A_2021h0c   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 206
1h0c_A_2021h0c   A     PLPPYRIDOXAL-5'-PHOSPHATE Q - 208
1h0c_A_2021h0c   A     AOA(AMINOOXY)ACETIC ACID Q - 208
1h0c_A_2021h0c   A     PLPPYRIDOXAL-5'-PHOSPHATE K - 209
1h0c_A_2021h0c   A     AOA(AMINOOXY)ACETIC ACID K - 209
1h0c_A_2021h0c   A     GOLGLYCEROL N - 212
1h0c_A_2021h0c   A     PLPPYRIDOXAL-5'-PHOSPHATE P - 215
1h0c_A_2021h0c   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 216
1h0c_A_2021h0c   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 217
1pmm_A_2671pmm   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 273
1pmm_A_2671pmm   A     PLPPYRIDOXAL-5'-PHOSPHATE H - 275
1pmm_A_2671pmm   A     PLPPYRIDOXAL-5'-PHOSPHATE K - 276
1pmm_A_2671pmm   A     PLPPYRIDOXAL-5'-PHOSPHATE C - 284
1pmm_A_2671pmm   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 285
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h0c_A_2021h0c   A AC1PLP BINDING SITE FOR CHAIN AQ - 208
1h0c_A_2021h0c   A AC1PLP BINDING SITE FOR CHAIN AK - 209

Clusters included in this Subclass
CLUSTER: HA.11.31