Information on SUBCLASS 10.11.1 |
Subclass Accession number: 6577
Subclass: 10.11.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0009374 (>50 %) GO:0019842 (>75 %) SCOP : 50875 (>50 %) 50876 (>50 %) 50877 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 40.7 +/- 34.2 Average RMSD (Å) : 1.133 +/- 0.493 Consensus geometry
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Consensus Sequence: | XhXpXXXXpGScXh |
(φψ)-conformation: | bbpabppaalppbb |
Pattern: | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x |
Conservation: | 0.131 | -0.513 | -0.084 | -1.588 | -0.513 | 0.131 | -0.298 | -0.728 | 0.131 | -0.084 | 3.139 | 1.420 | -0.513 | -0.084 | -0.728 | 0.561 | -0.513 | 0.131 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1luq_A_1054 | 1luq | A | 1058 | 1075 | GRYDSAPATDGSGTALGW | EEE-SS---SS--EEEEE | ebbxabwxaavxxbxbbb |
1r5l_A_101 | 1r5l | A | 101 | 118 | HGVLRSRDPTGSKVLIYR | EEE-SS--TT--EEEEEE | bbbxabxxaavxxbbbbb |
1rxj_A_54 | 1rxj | A | 58 | 75 | GRYDSAPATDGSGTALGW | EEE-SS--SSS--EEEEE | ebbxabxpaavxxbxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1luq_A_1054 | 1luq | A | BTNBIOTIN | W - 1079 |
1luq_A_1054 | 1luq | A | GOLGLYCEROL | K - 1080 |
1r5l_A_101 | 1r5l | A | MSESELENOMETHIONINE | H - 101 |
1r5l_A_101 | 1r5l | A | MSESELENOMETHIONINE | G - 102 |
1r5l_A_101 | 1r5l | A | MSESELENOMETHIONINE | L - 104 |
1r5l_A_101 | 1r5l | A | VIV(2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL | L - 115 |
1r5l_A_101 | 1r5l | A | MSESELENOMETHIONINE | I - 116 |
1r5l_A_101 | 1r5l | A | VIV(2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL | Y - 117 |
1r5l_A_101 | 1r5l | A | MSESELENOMETHIONINE | R - 118 |
1rxj_A_54 | 1rxj | A | BNI5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE | W - 79 |
Clusters included in this Subclass |
CLUSTER: HA.9.59 |