Information on SUBCLASS 11.5.1 |
Subclass Accession number: 6586
Subclass: 11.5.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004175 (>75 %) GO:0004222 (>75 %) GO:0005509 (>75 %) GO:0008233 (>75 %) GO:0008237 (>75 %) GO:0008270 (>75 %) GO:0046914 (>75 %) SCOP : 55485 (>75 %) 55486 (>75 %) 55519 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 53.5 +/- 18.0 Average RMSD (Å) : 0.225 +/- 0.096 Consensus geometry
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Consensus Sequence: | XAYXXpMCcXppSVh |
(φψ)-conformation: | bbpplapgpaaapbb |
Pattern: | [G] | x | [A] | [Y] | [LTV] | [AGKS] | [RST] | [M] | [C] | [DN] | [EPS] | [KR] | [RSY] | [S] | [V] | [AG] | [ILV] | [IV] | [KQ] |
Conservation: | 1.165 | -1.300 | 0.255 | 1.619 | -0.859 | -1.137 | -0.938 | 0.710 | 2.529 | 0.116 | -0.882 | 0.081 | -1.152 | 0.255 | 0.255 | -0.212 | -0.339 | 0.029 | -0.194 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bud_A_109 | 1bud | A | 109 | 127 | GLAYVASMCNPKRSVGVIQ | EEE-SS-TT-TTTSEEEEE | bbbxblapvxaaaxbbbbx |
1kuf_A_111 | 1kuf | A | 111 | 129 | GWAYVGRMCDEKYSVAVVK | EEE-TT-TT-TTTSEEEEE | ebbxxvapgxaaaxbbbbx |
1qua_A_109 | 1qua | A | 109 | 127 | GLAYLKTMCNSKYSVGLIQ | EEE-TT-TT-TTT-EEEEE | bbbxxlapvxaaaxbbbbx |
4aig_*_109 | 4aig | - | 109 | 127 | GKAYTSSMCNPRSSVGIVK | EEE-SS-TT-TTTSEEEEE | bbbxxlapvxaaaxbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bud_A_109 | 1bud | A | ZN3ZINC ION, 1 WATER COORDINATED | G - 109 |
1bud_A_109 | 1bud | A | ZN3ZINC ION, 1 WATER COORDINATED | L - 110 |
1kuf_A_111 | 1kuf | A | CDCADMIUM ION | G - 111 |
1kuf_A_111 | 1kuf | A | CDCADMIUM ION | G - 116 |
1kuf_A_111 | 1kuf | A | CDCADMIUM ION | R - 117 |
1kuf_A_111 | 1kuf | A | CDCADMIUM ION | M - 118 |
1kuf_A_111 | 1kuf | A | CDCADMIUM ION | E - 121 |
1kuf_A_111 | 1kuf | A | CDCADMIUM ION | K - 122 |
4aig_*_109 | 4aig | * | CACALCIUM ION | G - 109 |
4aig_*_109 | 4aig | * | FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID | G - 109 |
4aig_*_109 | 4aig | * | FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID | K - 110 |
4aig_*_109 | 4aig | * | FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID | A - 111 |
Clusters included in this Subclass |
CLUSTER: HA.10.24 |