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Information on SUBCLASS 12.3.1
Subclass Accession number: 6592
Subclass: 12.3.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.4 (>75 %)  3.4.21 (>75 %)  3.4.21 (>75 %)  3.4.21.4 (>75 %)  
GO : GO:0004175 (>75 %)  GO:0004252 (>75 %)  GO:0004252 (>75 %)  GO:0005509 (>75 %)  GO:0008233 (>75 %)  GO:0008236 (>75 %)  GO:0008236 (>75 %)  
SCOP : 50493 (>75 %)  50493 (>75 %)  50494 (>75 %)  50494 (>75 %)  50514 (>75 %)  50514 (>75 %)  
 Number of loops: 7

Average sequence ID (%) : 38.1 +/- 25.5
Average RMSD (Å) : 0.557 +/- 0.282

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hLGXHphpppEXpXQX
(φψ)-conformation: bblpapaabpbaapbb
Pattern: [DEQR][ILV][ILVW][FL][G][ar][HN][NS][IKL]x[ekr][denr][EN][ADENP][dt][AEKQR][q][fitv][fhmr]
Conservation:0.1340.571-0.4170.4352.418-0.6422.1060.805-0.350-1.027-0.639-0.8330.764-0.689-0.410-0.5290.329-0.997-1.030
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1azz_A_631azz   A6482DVVLGAHNIREDEATQVTIEEEES-SBSSS--TT-EEEbxbbvbaxaaxbxaaxbbb
1bqy_A_651bqy   A6583QLLFGVHSKKILNEDEQTREEEES-S-SSS--TT-EEEbbbbvxaxaabxxaaxbbb
1gvz_A_651gvz   A6583QIWLGRHNLSKDEDTAQFHEEEES-SBTTS--TT-EEEbbbbvxabaabxbaaxbxb
1orf_A_641orf   A6482QVILGAHSITREEPTKQIMEEEES-SBSSS--TT-EEEbbbblxaxaapxbaaxbxb
1ppf_E_651ppf   E6583RVVLGAHNLSRREPTRQVFEEEES-SBTTS--TT-EEExbbbvxabaabxbaaxbbb
1ton_*_651ton   -6583QVLLGRNNLFKDEPFAQRREEEES-SBTTS--TT-EEEbbbbvbaxaabxbaapbbb
2pka_A_642pka   A6482EVWLGRHNLFENENTAQFFEEEES-S-TTS--TT-EEEbbbbvbabaabxbaaxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gvz_A_651gvz   A     GOLGLYCEROL Q - 65
1gvz_A_651gvz   A     GOLGLYCEROL W - 67
1gvz_A_651gvz   A     GOLGLYCEROL R - 70
1gvz_A_651gvz   A     GOLGLYCEROL N - 72
1gvz_A_651gvz   A     GOLGLYCEROL L - 73
1gvz_A_651gvz   A     GOLGLYCEROL S - 74
1gvz_A_651gvz   A     GOLGLYCEROL K - 75
1gvz_A_651gvz   A     GOLGLYCEROL D - 76
1ppf_E_651ppf   E     NAGN-ACETYL-D-GLUCOSAMINE R - 65
1ppf_E_651ppf   E     FUCFUCOSE R - 65
1ppf_E_651ppf   E     NAGN-ACETYL-D-GLUCOSAMINE R - 76
1ppf_E_651ppf   E     NAGN-ACETYL-D-GLUCOSAMINE V - 82
1ppf_E_651ppf   E     FUCFUCOSE V - 82
1ppf_E_651ppf   E     NAGN-ACETYL-D-GLUCOSAMINE F - 83
1ppf_E_651ppf   E     FUCFUCOSE F - 83
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gvz_A_651gvz   A AC3GOL BINDING SITE FOR CHAIN AR - 70

Clusters included in this Subclass
CLUSTER: HA.11.9