Information on SUBCLASS 12.9.1 |
Subclass Accession number: 6598
Subclass: 12.9.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7 (>50 %) 2.7.1 (>50 %) 2.7.1.1 GO : GO:0004396 (>75 %) GO:0005524 (>75 %) GO:0016301 (>75 %) GO:0016772 (>75 %) GO:0016773 (>75 %) GO:0017076 (>75 %) GO:0019200 (>75 %) GO:0030554 (>75 %) SCOP : 53066 (>75 %) 53067 (>75 %) 53083 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 70.7 +/- -25.6 Average RMSD (Å) : 0.200 +/- 0.000 Consensus geometry
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Consensus Sequence: | EEhpphphVEGDpGpM |
(φψ)-conformation: | bpaaapaabpeabebb |
Pattern: | [CST] | [N] | [A] | [C] | [Y] | [M] | [E] | [E] | [LM] | [KQR] | [HN] | [IV] | [DE] | [LM] | [V] | [E] | [G] | [D] | [EQ] | [G] | [QR] | [M] | [C] | [IV] | [N] |
Conservation: | -1.681 | 0.665 | -0.446 | 2.332 | 1.221 | 0.109 | 0.109 | 0.109 | -0.824 | -1.249 | -0.487 | -0.721 | -0.604 | -0.887 | -0.446 | 0.109 | 0.665 | 0.665 | -0.711 | 0.665 | -0.984 | 0.109 | 2.332 | -0.717 | 0.665 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cza_N_234 | 1cza | N | 234 | 258 | TNACYMEELRHIDLVEGDEGRMCIN | EEEEEEEEGGG-TTSS--SSEEEEE | bbbbbxbxaaabaabxeaxebbxbx |
1cza_N_682 | 1cza | N | 682 | 706 | SNACYMEEMKNVEMVEGDQGQMCIN | EEEEEEEETTT-TTSS--SSEEEEE | bbbbbxbxaaaxaabxeabebbxbx |
1v4s_A_230 | 1v4s | A | 230 | 254 | CNACYMEEMQNVELVEGDEGRMCVN | EEEEEEEEGGG-TTSS--SSEEEEE | bbbbbxbxaaaxaabpeabebbxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cza_N_234 | 1cza | N | GLCGLUCOSE | T - 234 |
1cza_N_234 | 1cza | N | GLCGLUCOSE | N - 235 |
1cza_N_234 | 1cza | N | GLCGLUCOSE | A - 236 |
1cza_N_234 | 1cza | N | GLCGLUCOSE | N - 258 |
1cza_N_682 | 1cza | N | GLCGLUCOSE | S - 682 |
1cza_N_682 | 1cza | N | GLCGLUCOSE | N - 683 |
1cza_N_682 | 1cza | N | GLCGLUCOSE | A - 684 |
1cza_N_682 | 1cza | N | GLCGLUCOSE | N - 706 |
1v4s_A_230 | 1v4s | A | AGCALPHA-D-GLUCOSE | C - 230 |
1v4s_A_230 | 1v4s | A | AGCALPHA-D-GLUCOSE | N - 231 |
1v4s_A_230 | 1v4s | A | AGCALPHA-D-GLUCOSE | A - 232 |
1v4s_A_230 | 1v4s | A | MRK2-AMINO-4-FLUORO-5-[(1-METHYL-1H-IMIDAZOL-2-YL) SULFANYL]-N-(1,3-THIAZOL-2-YL)BENZAMIDE | M - 235 |
1v4s_A_230 | 1v4s | A | MRK2-AMINO-4-FLUORO-5-[(1-METHYL-1H-IMIDAZOL-2-YL) SULFANYL]-N-(1,3-THIAZOL-2-YL)BENZAMIDE | R - 250 |
1v4s_A_230 | 1v4s | A | MRK2-AMINO-4-FLUORO-5-[(1-METHYL-1H-IMIDAZOL-2-YL) SULFANYL]-N-(1,3-THIAZOL-2-YL)BENZAMIDE | C - 252 |
1v4s_A_230 | 1v4s | A | AGCALPHA-D-GLUCOSE | N - 254 |
Clusters included in this Subclass |
CLUSTER: HA.11.23 |