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Information on SUBCLASS 12.9.1
Subclass Accession number: 6598
Subclass: 12.9.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7 (>50 %)  2.7.1 (>50 %)  2.7.1.1
GO : GO:0004396 (>75 %)  GO:0005524 (>75 %)  GO:0016301 (>75 %)  GO:0016772 (>75 %)  GO:0016773 (>75 %)  GO:0017076 (>75 %)  GO:0019200 (>75 %)  GO:0030554 (>75 %)  
SCOP : 53066 (>75 %)  53067 (>75 %)  53083 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 70.7 +/- -25.6
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: EEhpphphVEGDpGpM
(φψ)-conformation: bpaaapaabpeabebb
Pattern: [CST][N][A][C][Y][M][E][E][LM][KQR][HN][IV][DE][LM][V][E][G][D][EQ][G][QR][M][C][IV][N]
Conservation:-1.6810.665-0.4462.3321.2210.1090.1090.109-0.824-1.249-0.487-0.721-0.604-0.887-0.4460.1090.6650.665-0.7110.665-0.9840.1092.332-0.7170.665
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cza_N_2341cza   N234258TNACYMEELRHIDLVEGDEGRMCINEEEEEEEEGGG-TTSS--SSEEEEEbbbbbxbxaaabaabxeaxebbxbx
1cza_N_6821cza   N682706SNACYMEEMKNVEMVEGDQGQMCINEEEEEEEETTT-TTSS--SSEEEEEbbbbbxbxaaaxaabxeabebbxbx
1v4s_A_2301v4s   A230254CNACYMEEMQNVELVEGDEGRMCVNEEEEEEEEGGG-TTSS--SSEEEEEbbbbbxbxaaaxaabpeabebbxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cza_N_2341cza   N     GLCGLUCOSE T - 234
1cza_N_2341cza   N     GLCGLUCOSE N - 235
1cza_N_2341cza   N     GLCGLUCOSE A - 236
1cza_N_2341cza   N     GLCGLUCOSE N - 258
1cza_N_6821cza   N     GLCGLUCOSE S - 682
1cza_N_6821cza   N     GLCGLUCOSE N - 683
1cza_N_6821cza   N     GLCGLUCOSE A - 684
1cza_N_6821cza   N     GLCGLUCOSE N - 706
1v4s_A_2301v4s   A     AGCALPHA-D-GLUCOSE C - 230
1v4s_A_2301v4s   A     AGCALPHA-D-GLUCOSE N - 231
1v4s_A_2301v4s   A     AGCALPHA-D-GLUCOSE A - 232
1v4s_A_2301v4s   A     MRK2-AMINO-4-FLUORO-5-[(1-METHYL-1H-IMIDAZOL-2-YL) SULFANYL]-N-(1,3-THIAZOL-2-YL)BENZAMIDE M - 235
1v4s_A_2301v4s   A     MRK2-AMINO-4-FLUORO-5-[(1-METHYL-1H-IMIDAZOL-2-YL) SULFANYL]-N-(1,3-THIAZOL-2-YL)BENZAMIDE R - 250
1v4s_A_2301v4s   A     MRK2-AMINO-4-FLUORO-5-[(1-METHYL-1H-IMIDAZOL-2-YL) SULFANYL]-N-(1,3-THIAZOL-2-YL)BENZAMIDE C - 252
1v4s_A_2301v4s   A     AGCALPHA-D-GLUCOSE N - 254

Clusters included in this Subclass
CLUSTER: HA.11.23