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Information on SUBCLASS 13.1.1
Subclass Accession number: 6600
Subclass: 13.1.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.18 (>75 %)  1.18.1 (>75 %)  1.18.1.2
GO : GO:0004324 (>75 %)  GO:0005489 (>75 %)  GO:0008937 (>75 %)  GO:0016730 (>75 %)  GO:0016731 (>75 %)  
SCOP : 50412 (>75 %)  63380 (>75 %)  63381 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 80.5 +/- 5.0
Average RMSD (Å) : 0.360 +/- 0.182

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hIhDGhDKNGKPHKLRL
(φψ)-conformation: bbppebpaalbppppbp
Pattern: [S][IV][G][IV][IV][AP][DP][G][iv][D][AK][N][G][K][P][EH][K][LV][R][L][Y][S]
Conservation:-0.216-0.5100.990-0.517-0.510-1.164-0.9610.990-1.9480.990-1.4690.9900.9900.3871.593-0.4760.387-1.0930.387-0.2161.593-0.216
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fnc_*_751fnc   -7596SVGVIPDGEDKNGKPHKLRLYSEEEEE-SSB-TTS-B---EEEEbbxbbwxebxaavbxpxxbxbx
1gaw_A_751gaw   A7596SIGVIADGVDKNGKPHKVRLYSEEEEE-SSB-TTS-B---EEEEbbbbbxxebxaavxwxxxbxbx
1ogi_A_591ogi   A5980SIGIIPPGVDKNGKPEKLRLYSEEEEE-SSB-TTS-B---EEEEbbbbbxxebxaavxpxxxbxbx
1qfz_A_691qfz   A6990SIGIVPDGIDKNGKPHKLRLYSEEEEE-SSB-TTS-B---EEEEbbxbbxxebxaavbwxxxbxbx
1sm4_A_1231sm4   A123144SIGVIADGVDANGKPHKLRLYSEEEEE-SSB-TTS-B---EEEEbbxbbxxebxaavbpxxxbxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fnc_*_751fnc   *     FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE S - 75
1fnc_*_751fnc   *     FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE P - 80
1fnc_*_751fnc   *     FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE R - 93
1fnc_*_751fnc   *     FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE L - 94
1fnc_*_751fnc   *     FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE Y - 95
1fnc_*_751fnc   *     FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE S - 96
1gaw_A_751gaw   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 75
1gaw_A_751gaw   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 93
1gaw_A_751gaw   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 94
1gaw_A_751gaw   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 95
1gaw_A_751gaw   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 96
1ogi_A_591ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 59
1ogi_A_591ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 64
1ogi_A_591ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 77
1ogi_A_591ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 78
1ogi_A_591ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 79
1ogi_A_591ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 80
1qfz_A_691qfz   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 69
1qfz_A_691qfz   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 69
1qfz_A_691qfz   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 87
1qfz_A_691qfz   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 88
1qfz_A_691qfz   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 89
1qfz_A_691qfz   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 90
1qfz_A_691qfz   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 90
1sm4_A_1231sm4   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 123
1sm4_A_1231sm4   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 141
1sm4_A_1231sm4   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 142
1sm4_A_1231sm4   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 143
1sm4_A_1231sm4   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 144
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ogi_A_591ogi   A AC1FAD BINDING SITE FOR CHAIN AR - 77
1ogi_A_591ogi   A AC1FAD BINDING SITE FOR CHAIN AL - 78
1ogi_A_591ogi   A AC1FAD BINDING SITE FOR CHAIN AY - 79
1ogi_A_591ogi   A AC1FAD BINDING SITE FOR CHAIN AS - 80

Clusters included in this Subclass
CLUSTER: HA.12.6