Information on SUBCLASS 13.2.1 |
Subclass Accession number: 6601
Subclass: 13.2.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005529 (>75 %) GO:0030145 (>75 %) GO:0030246 (>75 %) GO:0046914 (>75 %) SCOP : 49898 (>75 %) 49899 (>75 %) 49900 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 69.9 +/- 10.1 Average RMSD (Å) : 0.350 +/- 0.191 Consensus geometry
|
Consensus Sequence: | hDTYXNpphcDPXpXHh |
(φψ)-conformation: | bbabwbaaalppabpbb |
Pattern: | [FI] | [V] | [AG] | [V] | [E] | [FL] | [D] | [ST] | [Y] | [PS] | [N] | [ST] | [DE] | [IY] | [GN] | [D] | [P] | [PS] | [TY] | [DPQ] | [H] | [IV] | [G] | [I] | [DN] | [IV] |
Conservation: | -0.854 | 0.003 | -0.854 | 0.003 | 0.557 | -0.854 | 1.111 | -0.573 | 1.665 | -0.914 | 1.111 | -0.670 | -0.116 | -1.007 | -0.545 | 1.111 | 1.665 | -1.007 | -1.066 | -1.348 | 2.219 | -0.273 | 1.111 | 0.003 | -0.207 | -0.273 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h9w_A_4 | 1h9w | A | 4 | 29 | IVAVELDSYPNTDIGDPSYPHIGIDI | EEEEEEE-S--GGGT--SS-EEEEEE | bbbbbbxabwbaaavxxabwbbbbbb |
1mvq_A_4 | 1mvq | A | 4 | 29 | IVAVELDTYPNTDIGDPSYQHIGINI | EEEEEEE-S--GGGT--SS-EEEEEE | bbbbbbbabwbaaavxxabxbbbbbb |
1nls_*_4 | 1nls | - | 4 | 29 | IVAVELDTYPNTDIGDPSYPHIGIDI | EEEEEEE-S--GGGT--SS-EEEEEE | bbbbbbxabwbaaavxxabwbbbbbb |
1v6i_A_114 | 1v6i | A | 117 | 142 | FVGVEFDTYSNSEYNDPPTDHVGIDV | EEEEEEE-S--GGGT--SS-EEEEEE | bbbbbbxabxxaaalxxabpbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.12.22 |
CLUSTER: HA.14.8 |