Home

Classification

Query

Statistics

Contact

Links

Help

PDB code:

Information on SUBCLASS 1.1.12

Subclass Accession number: 6625 Subclass: 1.1.12 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates:

Number of loops: 4 Average sequence ID (%) : 10.0 +/- 18.6 Average RMSD (Å) : 0.550 +/- 0.191 Consensus geometry d (Å): 5 delta (°): 0-45 theta (°): 0-45 rho (°): 0-45

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bt4_A_143	1bt4	A	148	152	LTSNE	EESEE	bbabx
1fkn_A_318	1fkn	A	321	325	KFAIS	EE-EE	bxabb
1olt_A_53	1olt	A	58	62	HIPFC	EE-EE	xbaxb
1req_A_235	1req	A	235	239	WNSIS	EE-EE	xxabb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1bt4_A_143	1bt4	A	PLPPYRIDOXAL-5'-PHOSPHATE	T - 149
1bt4_A_143	1bt4	A	PLPPYRIDOXAL-5'-PHOSPHATE	N - 151
1bt4_A_143	1bt4	A	PLPPYRIDOXAL-5'-PHOSPHATE	E - 152
1olt_A_53	1olt	A	SAMS-ADENOSYLMETHIONINE	Y - 56
1olt_A_53	1olt	A	SAMS-ADENOSYLMETHIONINE	H - 58
1olt_A_53	1olt	A	FS4IRON/SULFUR CLUSTER	F - 61
1olt_A_53	1olt	A	FS4IRON/SULFUR CLUSTER	C - 62
1olt_A_53	1olt	A	SAMS-ADENOSYLMETHIONINE	C - 62
1req_A_235	1req	A	DCADESULFO-COENZYME A	N - 236
1req_A_235	1req	A	DCADESULFO-COENZYME A	I - 238
1req_A_235	1req	A	DCADESULFO-COENZYME A	S - 239

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1olt_A_53	1olt	A	AC3SAM BINDING SITE FOR CHAIN A	Y - 56
1olt_A_53	1olt	A	AC3SAM BINDING SITE FOR CHAIN A	H - 58
1olt_A_53	1olt	A	AC1FS4 BINDING SITE FOR CHAIN A	C - 62

Clusters included in this Subclass

CLUSTER: AR.0.8

For any comment or web-related incidence, send an email to the webmaster.