Information on SUBCLASS 2.1.7 |
Subclass Accession number: 6648
Subclass: 2.1.7 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 14.3 +/- 18.2 Average RMSD (Å) : 0.657 +/- 0.237 Consensus geometry
|
Consensus Sequence: | XXhXpX |
(φψ)-conformation: | bbpabb |
Pattern: | [GLMP] | x | x | x | [np] | [eprs] | [NRWY] | x | x | x |
Conservation: | -0.794 | -0.109 | -0.056 | -0.507 | 2.224 | -0.516 | 0.532 | -0.775 | -1.000 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dv1_A_198 | 1dv1 | A | 200 | 209 | MEKYLENPRH | EEE--SS-EE | bbxxbabxbb |
1ee0_A_23 | 1ee0 | A | 28 | 37 | GTATPPNCVA | EEE--S-EEE | bbbbpaxbbx |
1hzp_A_3 | 1hzp | A | 9 | 18 | GAYRPERVVT | EEE--SEEEE | bbbbpaxxbx |
1jvb_A_89 | 1jvb | A | 89 | 96 | LVAVNPWQ.. | EEE---EE.. | xbbbxaxx.. |
1kol_A_88 | 1kol | A | 88 | 95 | LVSVPFNV.. | EEE--SEE.. | xbxbpaxx.. |
1mzj_A_11 | 1mzj | A | 18 | 27 | GSYRPRREVS | EEE--S-EEE | bbbbpaxxbx |
1ses_A_186 | 1ses | A | 187 | 195 | PMTLPSYAR. | EEE--SEEE. | wbbbxabbx. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dv1_A_198 | 1dv1 | A | PO4PHOSPHATE ION | E - 211 |
1hzp_A_3 | 1hzp | A | GOLGLYCEROL | A - 10 |
1hzp_A_3 | 1hzp | A | GOLGLYCEROL | Y - 11 |
1hzp_A_3 | 1hzp | A | GOLGLYCEROL | R - 12 |
1jvb_A_89 | 1jvb | A | MSESELENOMETHIONINE | V - 90 |
1jvb_A_89 | 1jvb | A | MSESELENOMETHIONINE | A - 91 |
1jvb_A_89 | 1jvb | A | MSESELENOMETHIONINE | V - 92 |
1jvb_A_89 | 1jvb | A | MSESELENOMETHIONINE | N - 93 |
1jvb_A_89 | 1jvb | A | ZNZINC ION | W - 95 |
1kol_A_88 | 1kol | A | ZNZINC ION | F - 93 |
1kol_A_88 | 1kol | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | F - 93 |
1kol_A_88 | 1kol | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | N - 94 |
Clusters included in this Subclass |
CLUSTER: AR.2.102 |
CLUSTER: AR.3.114 |
CLUSTER: AR.4.84 |
CLUSTER: AR.5.91 |