Information on SUBCLASS 4.14.1 |
Subclass Accession number: 670
Subclass: 4.14.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 11.1 +/- 12.9 Average RMSD (Å) : 0.833 +/- 0.351 Consensus geometry
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Consensus Sequence: | cpXppGXX |
(φψ)-conformation: | bbpaalpb |
Pattern: | [FMV] | x | x | [DG] | [QTY] | [ADR] | [DEK] | [DEN] | [G] | x | [CGT] | x | [ALP] | [LMT] | [IKL] |
Conservation: | 0.043 | -0.153 | -0.967 | 0.839 | -0.423 | -0.734 | 0.431 | 0.664 | 3.072 | -0.501 | -0.501 | -0.423 | -0.734 | -0.035 | -0.578 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ew0_A_214 | 1ew0 | A | 215 | 229 | VVSGQRKDGSTFPMK | EEEEE-TTS-EEEEE | xbbbbxaavxbbwbx |
1fhg_A_88 | 1fhg | A | 88 | 102 | FQIDYDEEGNCSLTI | EEEEE-TT-EEEEEE | bxbbbbaavxbbbbb |
1kmo_A_243 | 1kmo | A | 249 | 263 | MVGGTADNGFGTALL | EEEEE-TTSEEEEEE | bbbebxaavxbbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ew0_A_214 | 1ew0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | R - 214 |
1ew0_A_214 | 1ew0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 216 |
1ew0_A_214 | 1ew0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | S - 217 |
1ew0_A_214 | 1ew0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | G - 218 |
1ew0_A_214 | 1ew0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | Q - 219 |
1ew0_A_214 | 1ew0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | M - 228 |
1ew0_A_214 | 1ew0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 230 |
1ew0_A_214 | 1ew0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 232 |
1ew0_A_214 | 1ew0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | G - 233 |
1kmo_A_243 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | H - 246 |
1kmo_A_243 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | N - 247 |
1kmo_A_243 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | L - 248 |
1kmo_A_243 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | L - 262 |
1kmo_A_243 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | Y - 264 |
1kmo_A_243 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | R - 268 |
Clusters included in this Subclass |
CLUSTER: HA.4.149 |