Information on SUBCLASS 4.2.2 |
Subclass Accession number: 6753
Subclass: 4.2.2 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 12 Average sequence ID (%) : 27.7 +/- 24.0 Average RMSD (Å) : 0.658 +/- 0.261 Consensus geometry
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Consensus Sequence: | hXhXXhGX |
(φψ)-conformation: | bbpabpeb |
Pattern: | [ailvy] | [aknrst] | [AFLVY] | [kltv] | [AFITV] | [adegkqrt] | [ceknqr] | [ADEP] | [G] | [iptv] |
Conservation: | -0.388 | -0.747 | 0.195 | -0.519 | -0.337 | -0.623 | -0.419 | 0.665 | 2.587 | -0.414 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aoz_A_489 | 1aoz | A | 493 | 502 | IRFVADNPGV | EEEE--S-EE | bbbxxabpeb |
1aoz_A_88 | 1aoz | A | 91 | 100 | YNFTVDNPGT | EEEE--S-EE | bbbbbabxex |
1fwx_A_544 | 1fwx | A | 547 | 556 | VTFVAANPGV | EEEE--S-EE | bbbbxabxex |
1gyc_A_436 | 1gyc | A | 439 | 448 | IRFQTDNPGP | EEEE--S-EE | bbbbxabpew |
1itw_A_186 | 1itw | A | 186 | 195 | KAALIGAPGS | EEEE--SSEE | bbbbxabpeb |
1j9q_A_287 | 1j9q | A | 291 | 300 | AFYTFQQPGI | EEEE--S-EE | bbbbxabxex |
1m56_B_236 | 1m56 | B | 238 | 247 | LWFRAEREGI | EEEE-SS-EE | bbbbxabxeb |
1nif_*_118 | 1nif | - | 122 | 131 | LRFKATKPGV | EEEE--S-EE | bbbxxabweb |
1nif_*_287 | 1nif | - | 291 | 300 | AFYTFRQPGV | EEEE--S-EE | bbbbxabxex |
1qpo_A_40 | 1qpo | A | 43 | 52 | ASLVTREAGV | EEEEESS-EE | bbxbxabxeb |
2cua_A_133 | 2cua | A | 135 | 144 | VRYTFKRPGE | EEEE--S-EE | bbbbxabweb |
2gpr_*_13 | 2gpr | - | 13 | 22 | LKVLAPCDGT | EEEE-SSSEE | bxbxxabxeb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gyc_A_436 | 1gyc | A | NA6NAG BINDING SITE FOR CHAIN A | N - 436 |
1gyc_A_436 | 1gyc | A | CU2CU BINDING SITE FOR CHAIN A | H - 452 |
1gyc_A_436 | 1gyc | A | CU4CU BINDING SITE FOR CHAIN A | C - 453 |
Clusters included in this Subclass |
CLUSTER: AR.4.12 |