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Information on SUBCLASS 4.23.1
Subclass Accession number: 679
Subclass: 4.23.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0046914 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 15.2 +/- 14.1
Average RMSD (Å) : 1.100 +/- 0.436

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hpXppGXp
(φψ)-conformation: bbaaaebb
Pattern: [AGK][TY][LV][NST]x[EQS][EHY][G][ITY][KQT][AIW]
Conservation:-0.6210.4360.4190.086-1.1160.0150.1562.561-0.692-0.339-0.904
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jf9_A_2561jf9   A257267ATVSLSEGTTWEE--TTT--EEabbbaaaebbb
1juh_A_2241juh   A224234KYLNSQYGYQIEEEE-TTS-EEbbbbaaaebbb
1jva_A_6091jva   A610620GYVTDEHGIKAEEEE-TTS-EEbbbbaaaexbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1juh_A_2241juh   A     EDO1,2-ETHANEDIOL K - 224
1juh_A_2241juh   A     EDO1,2-ETHANEDIOL Y - 225
1juh_A_2241juh   A     EDO1,2-ETHANEDIOL L - 226
1juh_A_2241juh   A     EDO1,2-ETHANEDIOL N - 227
1juh_A_2241juh   A     EDO1,2-ETHANEDIOL S - 228
1juh_A_2241juh   A     EDO1,2-ETHANEDIOL Q - 229
1juh_A_2241juh   A     EDO1,2-ETHANEDIOL Y - 230
1juh_A_2241juh   A     EDO1,2-ETHANEDIOL G - 231
1juh_A_2241juh   A     EDO1,2-ETHANEDIOL Y - 232

Clusters included in this Subclass
CLUSTER: HA.6.104