Information on SUBCLASS 4.23.1 |
Subclass Accession number: 679
Subclass: 4.23.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0046914 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 15.2 +/- 14.1 Average RMSD (Å) : 1.100 +/- 0.436 Consensus geometry
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Consensus Sequence: | hpXppGXp |
(φψ)-conformation: | bbaaaebb |
Pattern: | [AGK] | [TY] | [LV] | [NST] | x | [EQS] | [EHY] | [G] | [ITY] | [KQT] | [AIW] |
Conservation: | -0.621 | 0.436 | 0.419 | 0.086 | -1.116 | 0.015 | 0.156 | 2.561 | -0.692 | -0.339 | -0.904 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jf9_A_256 | 1jf9 | A | 257 | 267 | ATVSLSEGTTW | EE--TTT--EE | abbbaaaebbb |
1juh_A_224 | 1juh | A | 224 | 234 | KYLNSQYGYQI | EEEE-TTS-EE | bbbbaaaebbb |
1jva_A_609 | 1jva | A | 610 | 620 | GYVTDEHGIKA | EEEE-TTS-EE | bbbbaaaexbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1juh_A_224 | 1juh | A | EDO1,2-ETHANEDIOL | K - 224 |
1juh_A_224 | 1juh | A | EDO1,2-ETHANEDIOL | Y - 225 |
1juh_A_224 | 1juh | A | EDO1,2-ETHANEDIOL | L - 226 |
1juh_A_224 | 1juh | A | EDO1,2-ETHANEDIOL | N - 227 |
1juh_A_224 | 1juh | A | EDO1,2-ETHANEDIOL | S - 228 |
1juh_A_224 | 1juh | A | EDO1,2-ETHANEDIOL | Q - 229 |
1juh_A_224 | 1juh | A | EDO1,2-ETHANEDIOL | Y - 230 |
1juh_A_224 | 1juh | A | EDO1,2-ETHANEDIOL | G - 231 |
1juh_A_224 | 1juh | A | EDO1,2-ETHANEDIOL | Y - 232 |
Clusters included in this Subclass |
CLUSTER: HA.6.104 |