Logo
Information on SUBCLASS 4.25.1
Subclass Accession number: 6794
Subclass: 4.25.1 PSSM
Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 25.9 +/- 21.0
Average RMSD (Å) : 0.725 +/- 0.263

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XhXXhPXX
(φψ)-conformation: bbabbwbb
Pattern: xx[FVY]x[AK][AL][P]x[GNSV]
Conservation:-1.000-0.261-0.063-0.7280.049-0.1772.373-0.494-0.699
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d0c_A_3481d0c   A348356LEFSAAPFSEEES---EExbxabbwbb
1jva_A_3171jva   A318326REVIKLPRGEE--B--EEbpxabbwbe
1m7v_A_2241m7v   A224232IHYNAAPFNEEES---EExxxabbwbb
1qmq_A_3981qmq   A398405.GVQALPLV.EES--EEE.bbabbwbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d0c_A_3481d0c   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 355
1d0c_A_3481d0c   A     INE3-BROMO-7-NITROINDAZOLE F - 355
1d0c_A_3481d0c   A     CADCACODYLIC ACID F - 355
1d0c_A_3481d0c   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 356
1d0c_A_3481d0c   A     INE3-BROMO-7-NITROINDAZOLE S - 356
1m7v_A_2241m7v   A     ARGARGININE F - 231
1m7v_A_2241m7v   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 231
1m7v_A_2241m7v   A     ARGARGININE N - 232
1m7v_A_2241m7v   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 232

Clusters included in this Subclass
CLUSTER: AR.3.121
CLUSTER: AR.5.78