Information on SUBCLASS 5.6.1 |
Subclass Accession number: 6810
Subclass: 5.6.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 19.2 +/- 23.1 Average RMSD (Å) : 0.800 +/- 0.351 Consensus geometry
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Consensus Sequence: | phXhpphXh |
(φψ)-conformation: | bbpaaaabb |
Pattern: | [degkns] | [FIVY] | [kqst] | [ILTV] | [AGPS] | [AILPV] | [DEHSY] | [CDEKS] | [FLMY] | [AILTV] | [AFLY] |
Conservation: | -1.563 | 1.120 | -0.678 | 1.739 | 0.144 | -0.959 | -0.464 | -0.651 | 1.087 | -0.012 | 0.237 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dpj_A_265 | 1dpj | A | 266 | 276 | NFTIGPYDYTL | EEEE-TTTSEE | xbbbxaaaabb |
1eag_A_271 | 1eag | A | 271 | 281 | KISVPASEFAA | EEEEEGGGGEE | bbbbpaaaabb |
1h8d_H_51 | 1h8d | H | 51 | 61 | WVLTAAHCLLY | EEEE-GGGTEE | bbbbxaaaabb |
1j71_A_269 | 1j71 | A | 269 | 279 | KITVPLSELIL | EEEEEGGGGEE | bbbbxaaaabb |
1lya_B_281 | 1lya | B | 282 | 292 | GYKLSPEDYTL | EEEE-TTTSEE | bbxbxaaaabb |
1mpp_*_264 | 1mpp | - | 266 | 276 | DVSVPISKMLL | EEEEEGGGGEE | bbbbxaaaabb |
2apr_*_267 | 2apr | - | 268 | 278 | SFQVSPDSLVF | EEEE-GGGGEE | xbbbxaaaaba |
2asi_*_295 | 2asi | - | 297 | 307 | EISVPVSKMLL | EEEEESGGGEE | bbbbpaaaabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dpj_A_265 | 1dpj | A | NAGN-ACETYL-D-GLUCOSAMINE | Y - 265 |
1dpj_A_265 | 1dpj | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 266 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h8d_H_51 | 1h8d | H | AC1TRIPEPTIDE PHOSPHONATE INHIBITOR BINDING SITE | H - 57 |
Clusters included in this Subclass |
CLUSTER: AR.3.95 |
CLUSTER: AR.4.91 |
CLUSTER: AR.5.99 |
CLUSTER: AR.6.63 |