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Information on SUBCLASS 5.9.1
Subclass Accession number: 6813
Subclass: 5.9.1 PSSM
Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 14.8 +/- 16.9
Average RMSD (Å) : 0.817 +/- 0.133

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XcXpXppXX
(φψ)-conformation: bbapappbb
Pattern: [GILTV][alw][AGV][FIV]x[KNS]x[ADST][ADGNPS][eqs][ens]x[ILTV][FITV]
Conservation:-0.826-0.900-0.2121.940-1.3251.705-0.4550.489-0.6530.3540.011-1.1790.7410.311
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cb8_A_4691cb8   A473486GAGINSNAPENITTEEEEEE-SSSEEEEbblxbbaxwxxxbb
1f1s_A_9321f1s   A932945TWAVIKHDNQESLIEEEEEE-S-S-EEEbbbbbxabaxxbbx
1ji1_A_5781ji1   A579592IAVVLNNDSVSHTVEEEEEE-SSS-EEEbbxbbbaxabxbxb
1lwj_A_4131lwj   A415428LKVFHNLSGEEVVFEEEEEE-SSS-EEEbbbbbbaxabpbbb
1n7o_A_8341n7o   A834847VWGIVKYDDSVSTIEEEEEESS-S-EEEbbbbbbabaxxbxb
1uok_*_5021uok   -504517LLVIANFTAEECIFEEEEEE-SSS-EEEbbbbbxababxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cb8_A_4691cb8   A     MANALPHA-D-MANNOSE N - 479
1cb8_A_4691cb8   A     RAMRHAMNOSE N - 479
1cb8_A_4691cb8   A     MANALPHA-D-MANNOSE A - 480
1cb8_A_4691cb8   A     GCUD-GLUCURONIC ACID A - 480
1cb8_A_4691cb8   A     MANALPHA-D-MANNOSE P - 481
1cb8_A_4691cb8   A     GCUD-GLUCURONIC ACID P - 481
1cb8_A_4691cb8   A     GCUD-GLUCURONIC ACID E - 482

Clusters included in this Subclass
CLUSTER: AR.5.57
CLUSTER: AR.6.12