Information on SUBCLASS 5.9.1 |
Subclass Accession number: 6813
Subclass: 5.9.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 14.8 +/- 16.9 Average RMSD (Å) : 0.817 +/- 0.133 Consensus geometry
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Consensus Sequence: | XcXpXppXX |
(φψ)-conformation: | bbapappbb |
Pattern: | [GILTV] | [alw] | [AGV] | [FIV] | x | [KNS] | x | [ADST] | [ADGNPS] | [eqs] | [ens] | x | [ILTV] | [FITV] |
Conservation: | -0.826 | -0.900 | -0.212 | 1.940 | -1.325 | 1.705 | -0.455 | 0.489 | -0.653 | 0.354 | 0.011 | -1.179 | 0.741 | 0.311 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cb8_A_469 | 1cb8 | A | 473 | 486 | GAGINSNAPENITT | EEEEEE-SSSEEEE | bblxbbaxwxxxbb |
1f1s_A_932 | 1f1s | A | 932 | 945 | TWAVIKHDNQESLI | EEEEEE-S-S-EEE | bbbbbxabaxxbbx |
1ji1_A_578 | 1ji1 | A | 579 | 592 | IAVVLNNDSVSHTV | EEEEEE-SSS-EEE | bbxbbbaxabxbxb |
1lwj_A_413 | 1lwj | A | 415 | 428 | LKVFHNLSGEEVVF | EEEEEE-SSS-EEE | bbbbbbaxabpbbb |
1n7o_A_834 | 1n7o | A | 834 | 847 | VWGIVKYDDSVSTI | EEEEEESS-S-EEE | bbbbbbabaxxbxb |
1uok_*_502 | 1uok | - | 504 | 517 | LLVIANFTAEECIF | EEEEEE-SSS-EEE | bbbbbxababxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cb8_A_469 | 1cb8 | A | MANALPHA-D-MANNOSE | N - 479 |
1cb8_A_469 | 1cb8 | A | RAMRHAMNOSE | N - 479 |
1cb8_A_469 | 1cb8 | A | MANALPHA-D-MANNOSE | A - 480 |
1cb8_A_469 | 1cb8 | A | GCUD-GLUCURONIC ACID | A - 480 |
1cb8_A_469 | 1cb8 | A | MANALPHA-D-MANNOSE | P - 481 |
1cb8_A_469 | 1cb8 | A | GCUD-GLUCURONIC ACID | P - 481 |
1cb8_A_469 | 1cb8 | A | GCUD-GLUCURONIC ACID | E - 482 |
Clusters included in this Subclass |
CLUSTER: AR.5.57 |
CLUSTER: AR.6.12 |