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Information on SUBCLASS 5.16.1
Subclass Accession number: 6820
Subclass: 5.16.1 PSSM
Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 48.5 +/- 19.8
Average RMSD (Å) : 0.325 +/- 0.096

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: hYGpGcpXR
(φψ)-conformation: bpealapbb
Pattern: [KPT][ILV][SY][G][EKN][G][DGK][NQ][ITV][R][DG]
Conservation:-1.068-0.208-0.2401.630-0.6151.630-1.218-0.164-0.6281.061-0.182
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1i24_A_2531i24   A254264TVYGKGGQTRGEEETTS--EEExxxeavapbbx
1kep_A_2161kep   A216226KLYGEGKNVRDEEETTS--EEEbbxeavaxbbb
1kew_A_2211kew   A222232PIYGKGDQIRDEEETTS--EEEwbxeavaxbbb
1orr_A_2271orr   A228238TISGNGKQVRDEEESSS--EEEbbxeavapbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1i24_A_2531i24   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE T - 254
1i24_A_2531i24   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE V - 255
1i24_A_2531i24   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE Y - 256
1i24_A_2531i24   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE G - 257
1i24_A_2531i24   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE G - 259
1i24_A_2531i24   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE Q - 261
1i24_A_2531i24   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE T - 262
1i24_A_2531i24   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE R - 263
1i24_A_2531i24   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE G - 264
1i24_A_2531i24   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE Y - 265
1i24_A_2531i24   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 266
1kep_A_2161kep   A     TDXTHYMIDINE-5'-DIPHOSPHO-BETA-D-XYLOSE R - 225
1kew_A_2211kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE P - 222
1kew_A_2211kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE I - 223
1kew_A_2211kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE Y - 224
1kew_A_2211kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE G - 225
1kew_A_2211kew   A     GOLGLYCEROL G - 225
1kew_A_2211kew   A     GOLGLYCEROL K - 226
1kew_A_2211kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE G - 227
1kew_A_2211kew   A     GOLGLYCEROL D - 228
1kew_A_2211kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE Q - 229
1kew_A_2211kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE I - 230
1kew_A_2211kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE R - 231
1kew_A_2211kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE W - 233
1kew_A_2211kew   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE W - 233
1orr_A_2271orr   A     CDPCYTIDINE-5'-DIPHOSPHATE T - 228
1orr_A_2271orr   A     CDPCYTIDINE-5'-DIPHOSPHATE I - 229
1orr_A_2271orr   A     CDPCYTIDINE-5'-DIPHOSPHATE S - 230
1orr_A_2271orr   A     CDPCYTIDINE-5'-DIPHOSPHATE G - 231
1orr_A_2271orr   A     CDPCYTIDINE-5'-DIPHOSPHATE Q - 235
1orr_A_2271orr   A     CDPCYTIDINE-5'-DIPHOSPHATE R - 237

Clusters included in this Subclass
CLUSTER: AR.4.75