Information on SUBCLASS 5.24.1 |
Subclass Accession number: 6828
Subclass: 5.24.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 33.3 +/- 32.4 Average RMSD (Å) : 0.633 +/- 0.231 Consensus geometry
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Consensus Sequence: | pXXXQXpXh |
(φψ)-conformation: | bbabplpba |
Pattern: | [KT] | [SV] | x | x | [Q] | x | [NQ] | x | [VY] | [AY] |
Conservation: | 0.103 | -0.686 | -1.058 | -0.214 | 2.452 | -0.795 | 0.657 | -0.450 | 0.192 | -0.200 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dbg_A_245 | 1dbg | A | 248 | 257 | TSKSQENVYY | EEESBS-EEE | bxabxlxbbb |
1ffv_B_107 | 1ffv | B | 107 | 116 | KVHFQMQEVA | EE-STT-EEE | bbabxvxxab |
1n62_B_110 | 1n62 | B | 110 | 119 | KVLFQNQEVA | EE-STT-EEE | bbabxvpxab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dbg_A_245 | 1dbg | A | MANALPHA-D-MANNOSE | Y - 257 |
1dbg_A_245 | 1dbg | A | RAMRHAMNOSE | Y - 257 |
1dbg_A_245 | 1dbg | A | GCUD-GLUCURONIC ACID | Y - 257 |
Clusters included in this Subclass |
CLUSTER: AR.5.122 |