Information on SUBCLASS 4.32.1 |
Subclass Accession number: 688
Subclass: 4.32.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004175 (>75 %) GO:0004190 (>75 %) GO:0008233 (>75 %) SCOP : 50629 (>75 %) 50630 (>75 %) 50646 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 11.9 +/- 12.0 Average RMSD (Å) : 1.000 +/- 0.361 Consensus geometry
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Consensus Sequence: | hpXXcXXX |
(φψ)-conformation: | bbppeapb |
Pattern: | [GV] | [GWY] | [LV] | [KQ] | [GKS] | x | [DG] | x | [AKN] | [FHW] | x | [HL] | [DTY] | [LVW] |
Conservation: | 0.157 | 0.486 | 1.181 | 1.773 | -0.354 | -0.713 | 1.389 | -1.433 | -0.593 | 0.846 | -1.193 | -0.239 | -0.953 | -0.354 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aop_*_347 | 1aop | - | 347 | 360 | GWVKGIDDNWHLTL | EEEE-STTEEEEEE | exbxxxeaxbbbxx |
1ivy_A_21 | 1ivy | A | 24 | 37 | GYLKSSGSKHLHYW | EEEE-STTEEEEEE | bbbxbpeaxbxxbb |
1usp_A_78 | 1usp | A | 83 | 96 | VGLQKAGLAFALDV | EEEEEETTEEEEEE | bbxbxbeaxbbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1usp_A_78 | 1usp | A | MSESELENOMETHIONINE | I - 79 |
1usp_A_78 | 1usp | A | MSESELENOMETHIONINE | L - 85 |
1usp_A_78 | 1usp | A | GOLGLYCEROL | K - 87 |
1usp_A_78 | 1usp | A | GOLGLYCEROL | F - 92 |
1usp_A_78 | 1usp | A | MSESELENOMETHIONINE | L - 98 |
1usp_A_78 | 1usp | A | MSESELENOMETHIONINE | E - 99 |
1usp_A_78 | 1usp | A | MSESELENOMETHIONINE | G - 100 |
1usp_A_78 | 1usp | A | MSESELENOMETHIONINE | H - 101 |
Clusters included in this Subclass |
CLUSTER: HA.3.212 |