Information on SUBCLASS 8.6.1 |
Subclass Accession number: 6883
Subclass: 8.6.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 62.2 +/- 20.8 Average RMSD (Å) : 0.360 +/- 0.134 Consensus geometry
|
Consensus Sequence: | VcNhXTXhGppV |
(φψ)-conformation: | bplppbppgpbb |
Pattern: | [PQ] | [IV] | [cmt] | [v] | [RT] | [FI] | [V] | [IV] | [KN] | [N] | [AV] | [PST] | [T] | [ATV] | [ILY] | [G] | [DEQ] | [NT] | [LV] | [FY] | [IL] | [T] | [G] |
Conservation: | -0.519 | 0.181 | -1.460 | -1.254 | -0.722 | -0.291 | 0.471 | 0.187 | -0.190 | 1.739 | -0.747 | -1.083 | 1.105 | -1.070 | -0.999 | 1.739 | -0.396 | -0.190 | -0.374 | 1.166 | -0.138 | 1.105 | 1.739 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cgt_*_584 | 1cgt | - | 584 | 606 | QVTVRFVVNNASTTLGQNLYLTG | EEEEEEEEE-----TT-EEEEEE | bbbbxxbbxvxxbxxvxbbbbbb |
1ciu_*_583 | 1ciu | - | 583 | 605 | QICVRFVVNNASTVYGENVYLTG | EEEEEEEEES----TT-EEEEEE | xbxbxxbbxvxxbxxvbbbbbbb |
1d3c_A_586 | 1d3c | A | 586 | 608 | QVSVRFVVNNATTALGQNVYLTG | EEEEEEEEE-----TT-EEEEEE | bbxbxxbbxvbxbbpgxbxbbbb |
1j11_A_419 | 1j11 | A | 419 | 441 | PVMQTIVVKNVPTTIGDTVYITG | EEEEEEEEE-----TT-EEEEEE | wbxbbbbbxlxxbbpgxbbbbbb |
1pam_A_586 | 1pam | A | 586 | 608 | QVTVRFVINNATTALGQNVFLTG | EEEEEEEEES----TT-EEEEEE | bbxbxbbbxlbxbxxvbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d3c_A_586 | 1d3c | A | GLCGLUCOSE | T - 597 |
1d3c_A_586 | 1d3c | A | GLCGLUCOSE | T - 598 |
1d3c_A_586 | 1d3c | A | GLCGLUCOSE | A - 599 |
1d3c_A_586 | 1d3c | A | GLCGLUCOSE | L - 600 |
1d3c_A_586 | 1d3c | A | GLCGLUCOSE | G - 601 |
1d3c_A_586 | 1d3c | A | GLCGLUCOSE | Q - 602 |
1d3c_A_586 | 1d3c | A | GLCGLUCOSE | N - 603 |
Clusters included in this Subclass |
CLUSTER: AR.7.9 |