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PDB code:

Information on SUBCLASS 1.1.8

Subclass Accession number: 69 Subclass: 1.1.8 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates:

Number of loops: 25 Average sequence ID (%) : 16.4 +/- 17.0 Average RMSD (Å) : 0.440 +/- 0.166 Consensus geometry d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 90-135

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1b33_N_33	1b33	N	42	50	RIQKMGGKI	HHHHTT-EE	aaaaavxbx
1bup_A_152	1bup	A	161	169	AGTIAGLNV	HHHHTT-EE	aaaaavxbx
1f0l_A_310	1f0l	A	310	317	IGSVMGIA.	HHHHHTEE.	aaaaavbb.
1f1u_A_163	1f1u	A	169	177	YLEDLGFRV	HHHHTT-EE	aaaaagxbx
1g60_A_76	1g60	A	85	93	YLVSKGMIF	HHHHTT-EE	aaaaavxbx
1g6h_A_76	1g6h	A	78	86	ELYHYGIVR	HHHHHTEEE	aaaaavbbb
1hc7_A_41	1hc7	A	57	65	MFKETGHQN	HHHHTT-EE	aaaaavxbx
1jdp_A_167	1jdp	A	178	186	VFQEEGLHT	HHHHHT-EE	aaaaavxxb
1js3_A_219	1js3	A	228	236	RDKAAGLIP	HHHHTT-EE	aaaaavxbx
1jv1_A_418	1jv1	A	432	440	WVLNAGGHF	HHHHTT-EE	aaaaavxbb
1k47_A_306	1k47	A	315	323	RWADLGIEL	HHHHTT-EE	aaaaavxxx
1kll_A_82	1kll	A	91	99	ELVDAGYEG	HHHHTT-EE	aaaaagxxx
1ky8_A_342	1ky8	A	354	362	DAVEKGGRV	HHHHTT-EE	aaaaagxbx
1lrz_A_130	1lrz	A	134	142	KMSNLGFEH	HHHHTT-EE	aaaaavxxx
1m1n_B_373	1m1n	B	382	390	FLLELGCEP	HHHHTT-EE	aaaaavxbw
1m22_A_149	1m22	A	153	161	RLRDAGAVV	HHHHTT-EE	aaaaavxbx
1mkp_*_225	1mkp	-	227	235	VLEEFGIKY	HHHHTTEEE	aaaaavxab
1mkz_A_28	1mkz	A	36	44	SAQEAGHHV	HHHHTT-EE	aaaaagxbx
1np7_A_88	1np7	A	95	103	IAKQINAKT	HHHHTTEEE	aaaaavxab
1o9p_A_89	1o9p	A	93	101	MLKRAGATI	HHHHTT-EE	aaaaavxbx
1ohe_A_246	1ohe	A	251	259	YFKNHNVTT	HHHHTTEEE	aaaaalxab
1pp7_U_80	1pp7	U	86	94	NLRDLAFEQ	HHHHTT-EE	aaaaavxbx
1qh4_A_308	1qh4	A	311	319	VLKRLRLQK	HHHHHTEEE	aaaaalbbb
1rtq_A_156	1rtq	A	164	172	QYKSEGKNV	HHHHTT-EE	aaaaavxxx
1xo1_A_44	1xo1	A	54	62	LAKSYSART	HHHHTTEEE	aaaaalxab

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1b33_N_33	1b33	N	CYCPHYCOCYANOBILIN	Y - 33
1b33_N_33	1b33	N	CYCPHYCOCYANOBILIN	E - 34
1b33_N_33	1b33	N	CYCPHYCOCYANOBILIN	W - 36
1b33_N_33	1b33	N	CYCPHYCOCYANOBILIN	F - 37
1b33_N_33	1b33	N	CYCPHYCOCYANOBILIN	Q - 40
1b33_N_33	1b33	N	CYCPHYCOCYANOBILIN	Q - 41
1b33_N_33	1b33	N	CYCPHYCOCYANOBILIN	Q - 44
1g6h_A_76	1g6h	A	HGCMETHYL MERCURY ION	A - 77
1js3_A_219	1js3	A	PLPPYRIDOXAL-5'-PHOSPHATE	T - 242
1kll_A_82	1kll	A	MSESELENOMETHIONINE	K - 88
1kll_A_82	1kll	A	MSESELENOMETHIONINE	L - 92
1mkz_A_28	1mkz	A	MSESELENOMETHIONINE	L - 33
1pp7_U_80	1pp7	U	ZNZINC ION	V - 85
1rtq_A_156	1rtq	A	ZNZINC ION	Q - 177

Clusters included in this Subclass

CLUSTER: HE.2.10

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