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Information on SUBCLASS 0.1.39
Subclass Accession number: 6990
Subclass: 0.1.39 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 4.8 +/- 6.1
Average RMSD (Å) : 0.350 +/- 0.129

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 90-135 rho (°): 270-315
Consensus Sequence: hphX
(φψ)-conformation: bpaa
Pattern: x[FIV][FHY][ALVW]x[AMV][ENPT][AGIY]xx[ALV]x[DNQR][FLWY]
Conservation:-0.6460.9812.441-0.533-0.9270.587-0.195-0.983-0.927-0.9830.308-0.4200.3120.987
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hp1_A_4321hp1   A433446VVYADMTGKEVIDYEEEEEEEHHHHHHHxbbbxbxaaaaaaa
1o26_A_1551o26   A157170RFFWTVNARSLMNFEEEEEEEHHHHHHHbbbbbbxaaaaaaa
1o26_A_611o26   A6376TFHVKAPIFVARQWEEEEEEEHHHHHHHbbbbbbxaaaaaaa
1qam_A_1221qam   A122135EIYLIVEYGFAKRLEEEEEEEHHHHHHHbbbbbbxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o26_A_611o26   A     PGETRIETHYLENE GLYCOL I - 70
1o26_A_611o26   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE F - 71
1o26_A_611o26   A     PGETRIETHYLENE GLYCOL A - 73
1o26_A_611o26   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE R - 74
1o26_A_611o26   A     PGETRIETHYLENE GLYCOL R - 74
1o26_A_611o26   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 75
1o26_A_611o26   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE Q - 75
1o26_A_611o26   A     PGETRIETHYLENE GLYCOL Q - 75
1o26_A_611o26   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE W - 76
1o26_A_1551o26   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE T - 156
1o26_A_1551o26   A     PGETRIETHYLENE GLYCOL T - 156
1o26_A_1551o26   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 163
1o26_A_1551o26   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 165
1o26_A_1551o26   A     PGETRIETHYLENE GLYCOL R - 165
1o26_A_1551o26   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 166
1o26_A_1551o26   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 169
1o26_A_1551o26   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 173
1o26_A_1551o26   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 174
1o26_A_1551o26   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE R - 174
1qam_A_1221qam   A     ACTACETATE ION F - 131
1qam_A_1221qam   A     ACTACETATE ION R - 134
1qam_A_1221qam   A     ACTACETATE ION L - 135

Clusters included in this Subclass
CLUSTER: EH.0.54
CLUSTER: EH.1.118