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| Information on SUBCLASS 3.1.1 |
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Subclass Accession number: 70
Subclass: 3.1.1 Type: HA beta-beta hairpin DB: ArchDB-KI |
Number of loops: 10 Average sequence ID (%) : 6.7 +/- 0.9 Average RMSD (Å) : 0.65 +/- 0.31 Consensus geometry
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| Consensus Sequence: | hXXXXXX |
| (φψ)-conformation: | bbaaalb |
| Pattern: | {ILVWY} | x | x | x | x | x | x | x |
| Conservation: | -0.048 | -0.602 | 0.502 | -0.748 | -0.115 | 0.098 | -1.184 | 2.097 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1e4y_A_123 | 1e4y | A | 125 | 132 | VHAPSGRV | EEGGGTEE | bxaaavxb |
| 1esm_D_175 | 1esm | D | 175 | 182 | YSHLIYDV | EETTTTEE | bbaaalbx |
| 1g0w_A_273 | 1g0w | A | 273 | 279 | WNPHLGY. | EETTTEE. | bbaaaex. |
| 1how_A_300 | 1how | A | 305 | 312 | VDSPENLI | EETTTTEE | abaaalxb |
| 1iep_A_256 | 1iep | A | 260 | 267 | VWKKYSLT | EEGGGTEE | bxaaalbx |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1e4y_A_123 | 1e4y | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | R - 123 |
| 1e4y_A_123 | 1e4y | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | R - 124 |
| 1e4y_A_123 | 1e4y | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | V - 132 |
| 1e4y_A_123 | 1e4y | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | Y - 133 |
| 1e4y_A_123 | 1e4y | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | H - 134 |
| PDB Site Annotated loops in this subclass |
| Loop | PDB | Chain | Site | Residue |
| 1e4y_A_123 | 1e4y | A | AC1AP5 BINDING SITE FOR CHAIN A | R - 123 |
| 1e4y_A_123 | 1e4y | A | AC1AP5 BINDING SITE FOR CHAIN A | Y - 133 |
| 1e4y_A_123 | 1e4y | A | AC1AP5 BINDING SITE FOR CHAIN A | H - 134 |
| Clusters included in this Subclass |
| CLUSTER: HA.3.8 |
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