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Information on SUBCLASS 1.1.8
Subclass Accession number: 7024
Subclass: 1.1.8 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 34

Average sequence ID (%) : 11.7 +/- 16.5
Average RMSD (Å) : 0.497 +/- 0.171

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: hhXXX
(φψ)-conformation: bbpaa
Pattern: x[cfgilmvy]xx[agnpqst]xxxxxx[afgiltv]
Conservation:0.0462.442-0.953-0.4680.594-0.391-0.306-0.140-0.195-0.817-1.0371.227
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1agx_*_851agx   -8798VITHGTDTMEETEEE--GGGHHHHbbxbxaaaaaaa
1b7g_O_501b7g   O5060.IYVPQQSIKKF.EE--GGGHHHH.bbbpaaaaaaa
1b9b_A_381b9b   A4051VVCPPFTALSEVEEE--GGGHHHHbbbwxaaaaaaa
1bdm_A_351bdm   A3849QLLEIPQAMKALEEE--GGGHHHHbbbbxaaaaaaa
1bg6_*_781bg6   -8091LIVVPAIHHASIEE-S-GGGHHHHbbbbxaaaaaaa
1bpy_A_2531bpy   A257268IRLIPKDQYYCGEEE--GGGHHHHbbxbpaaaaaaa
1ekq_A_191ekq   A2132HSITNNVVTNFTEEE--TTTHHHHxbbbxaaaaaaa
1f7u_A_3661f7u   A368379IYVIASQQDLHAEEE--GGGHHHHbbxbpaaaaaaa
1gyx_A_401gyx   A4354LQQIQPESWQAIEEE--GGGHHHHbbxbxaaaaaaa
1hti_A_371hti   A4051VCAPPTAYIDFAEEE--GGGHHHHbbbppaaaaaaa
1i6k_A_1401i6k   A140151IVPVGEDQKQHIEEE--GGGHHHHbbxbxaaaaaaa
1jcl_A_451jcl   A4556AICIYPRFIPIAEEE--GGGHHHHbbbbxaaaaaaa
1jms_A_4281jms   A435446LVMCPYDRRAFAEEE--GGGHHHHbbbbxaaaaaaa
1jql_B_21jql   B212.IRLYPEQLRAQ.EE--GGGHHHH.xbbpaaaaaaa
1kkh_A_2851kkh   A288299IILVNEEKEKELEEE--GGGHHHHbbxxbaaaaaaa
1kv5_A_381kv5   A4051VVASTFVHLAMTEEE--GGGHHHHbbbxxaaaaaaa
1m0u_A_761m0u   A7788DVRVTRDEWPALEEEE-TTTHHHHxxbxxaaaaaaa
1mo0_A_361mo0   A3950VVAPPAPYLAYAEEE--GGGHHHHbbbwxaaaaaaa
1n55_A_381n55   A4051VVAPTFVHIPLVEEE--GGGHHHHbbbebaaaaaaa
1ney_A_361ney   A3950VICPPATYLDYSEEE--GGGHHHHbbbxwaaaaaaa
1nns_A_821nns   A8495VITHGTDTMEETEEE--SSSHHHHbbxbxaaaaaaa
1nyt_A_331nyt   A3546RVLAPINDFINTEEE--TT-HHHHbbxxwaaaaaaa
1o6z_A_481o6z   A5061VFVDIPDKEDDTEEE--GGGHHHHbxbbxaaaaaaa
1o7j_A_881o7j   A90101VITHGTDTVEESEEE--STTHHHHbbxbxaaaaaaa
1qam_A_971qam   A99110FGNIPYNISTDIEEE--GGGHHHHbbxxxaaaaaaa
1qop_B_121qop   B1425GMYVPQILMPALEEES-GGGHHHHebxbwaaaaaaa
1r3e_A_2401r3e   A240251RVVVHQESTKMIEEE--TTTHHHHxbbbxaaaaaaa
1tcd_A_391tcd   A4152VVAPTFLHIPMTEEE--GGGHHHHbbbwxaaaaaaa
1tmh_A_391tmh   A4152AIAPPEMYIDMAEEE--GGGHHHHbbbxpaaaaaaa
1tph_1_371tph   14051VCGAPSIYLDFAEEE--GGGHHHHbbxxwaaaaaaa
2pva_A_982pva   A98108.TGINPVYVISQ.EEE-GGGHHHH.bxbxaaaaaaa
4pga_A_934pga   A95106VITHGTDTLEETEEE--STTHHHHbbxbxaaaaaaa
5mdh_A_355mdh   A3849VLLDITPMMGVLEEE--GGGHHHHbbbbxaaaaaaa
7mdh_A_787mdh   A8192KLLGSERSFQALEEE--GGGHHHHbxbbxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bdm_A_351bdm   A     NAXBETA-6-HYDROXY-1,4,5,6-TETRHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE L - 40
1bdm_A_351bdm   A     NAXBETA-6-HYDROXY-1,4,5,6-TETRHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE E - 41
1bdm_A_351bdm   A     NAXBETA-6-HYDROXY-1,4,5,6-TETRHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE I - 42
1bdm_A_351bdm   A     NAXBETA-6-HYDROXY-1,4,5,6-TETRHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE A - 45
1bpy_A_2531bpy   A     DOC2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE R - 254
1bpy_A_2531bpy   A     MGMAGNESIUM ION R - 254
1bpy_A_2531bpy   A     MGMAGNESIUM ION I - 255
1bpy_A_2531bpy   A     DOC2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE D - 256
1bpy_A_2531bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE D - 256
1bpy_A_2531bpy   A     MGMAGNESIUM ION D - 256
1bpy_A_2531bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE L - 270
1bpy_A_2531bpy   A     DOC2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE Y - 271
1bpy_A_2531bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE Y - 271
1bpy_A_2531bpy   A     DOC2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE F - 272
1bpy_A_2531bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE F - 272
1bpy_A_2531bpy   A     MGMAGNESIUM ION F - 272
1bpy_A_2531bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE T - 273
1ekq_A_191ekq   A     CSWCYSTEINE-S-DIOXIDE T - 24
1ekq_A_191ekq   A     CSWCYSTEINE-S-DIOXIDE N - 25
1ekq_A_191ekq   A     CSWCYSTEINE-S-DIOXIDE V - 28
1ekq_A_191ekq   A     CSWCYSTEINE-S-DIOXIDE T - 32
1f7u_A_3661f7u   A     ARGARGININE Y - 369
1f7u_A_3661f7u   A     ARGARGININE V - 370
1f7u_A_3661f7u   A     ARGARGININE I - 371
1f7u_A_3661f7u   A     ARGARGININE Q - 375
1f7u_A_3661f7u   A     ARGARGININE H - 378
1f7u_A_3661f7u   A     ARGARGININE F - 382
1gyx_A_401gyx   A     BEZBENZOIC ACID W - 51
1i6k_A_1401i6k   A     MSESELENOMETHIONINE V - 141
1i6k_A_1401i6k   A     TYMTRYPTOPHANYL-5'AMP V - 141
1i6k_A_1401i6k   A     TYMTRYPTOPHANYL-5'AMP P - 142
1i6k_A_1401i6k   A     MSESELENOMETHIONINE V - 143
1i6k_A_1401i6k   A     TYMTRYPTOPHANYL-5'AMP V - 143
1i6k_A_1401i6k   A     TYMTRYPTOPHANYL-5'AMP G - 144
1i6k_A_1401i6k   A     TYMTRYPTOPHANYL-5'AMP E - 145
1i6k_A_1401i6k   A     TYMTRYPTOPHANYL-5'AMP D - 146
1i6k_A_1401i6k   A     MSESELENOMETHIONINE Q - 147
1i6k_A_1401i6k   A     TYMTRYPTOPHANYL-5'AMP Q - 147
1i6k_A_1401i6k   A     MSESELENOMETHIONINE Q - 149
1i6k_A_1401i6k   A     MSESELENOMETHIONINE H - 150
1i6k_A_1401i6k   A     TYMTRYPTOPHANYL-5'AMP H - 150
1i6k_A_1401i6k   A     MSESELENOMETHIONINE I - 151
1i6k_A_1401i6k   A     TYMTRYPTOPHANYL-5'AMP I - 151
1i6k_A_1401i6k   A     MSESELENOMETHIONINE L - 153
1i6k_A_1401i6k   A     MSESELENOMETHIONINE T - 154
1i6k_A_1401i6k   A     MSESELENOMETHIONINE F - 161
1i6k_A_1401i6k   A     MSESELENOMETHIONINE Y - 165
1jcl_A_451jcl   A     HPD1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE C - 47
1jms_A_4281jms   A     MGMAGNESIUM ION R - 432
1jms_A_4281jms   A     MGMAGNESIUM ION D - 434
1jms_A_4281jms   A     MGMAGNESIUM ION W - 450
1m0u_A_761m0u   A     GTTGLUTATHIONE W - 85
1n55_A_381n55   A     GOLGLYCEROL F - 45
1nns_A_821nns   A     ASPASPARTIC ACID H - 87
1nns_A_821nns   A     ASPASPARTIC ACID G - 88
1nns_A_821nns   A     ASPASPARTIC ACID T - 89
1nns_A_821nns   A     ASPASPARTIC ACID D - 90
1nns_A_821nns   A     ASPASPARTIC ACID T - 91
1nyt_A_331nyt   A     DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE Y - 33
1o6z_A_481o6z   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 52
1o6z_A_481o6z   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 53
1o6z_A_481o6z   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 54
1qam_A_971qam   A     ACTACETATE ION T - 108
2pva_A_982pva   A     DTDDITHIANE DIOL V - 103
5mdh_A_355mdh   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 40
5mdh_A_355mdh   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 41
5mdh_A_355mdh   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 42
5mdh_A_355mdh   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE M - 45
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1bpy_A_2531bpy   A ACTACTIVE SITE OF NUCLEOTIDYL TRANSFER.D - 256
1gyx_A_401gyx   A AC2BEZ BINDING SITE FOR CHAIN AW - 51
4pga_A_934pga   A AS1DESCRIPTION NOT PROVIDEDT - 100
4pga_A_934pga   A AS1DESCRIPTION NOT PROVIDEDD - 101

Clusters included in this Subclass
CLUSTER: EH.4.119
CLUSTER: EH.4.25
CLUSTER: EH.6.0